Evidence map›Paper›PMID 35100428›Full record

ArticleNucleic acids research2022

Vimentin binds to G-quadruplex repeats found at telomeres and gene promoters.

Silvia Ceschi, Michele Berselli, Marta Cozzaglio, Mery Giantin, Stefano Toppo, Barbara Spolaore, Claudia Sissi

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Silvia CeschiDepartment of Pharmaceutical and Pharmacological Sciences, University of Padova, Padova 35131, Italy.
Michele BerselliDepartment of Molecular Medicine, University of Padova, Padova 35131, Italy.
Marta CozzaglioDepartment of Pharmaceutical and Pharmacological Sciences, University of Padova, Padova 35131, Italy.
Mery GiantinDepartment of Comparative Biomedicine and Food Science, University of Padova, Legnaro 35020, Italy.
Stefano ToppoCRIBI Biotechnology Center (Centro di Ricerca Interdipartimentale per le Biotecnologie Innovative), University of Padova, Padova 35131, Italy.ORCID 0000-0002-0246-3119
Barbara SpolaoreDepartment of Pharmaceutical and Pharmacological Sciences, University of Padova, Padova 35131, Italy.
Claudia SissiDepartment of Pharmaceutical and Pharmacological Sciences, University of Padova, Padova 35131, Italy.ORCID 0000-0002-9713-1415
University of Padua · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

G-quadruplex (G4) structures that can form at guanine-rich genomic sites, including telomeres and gene promoters, are actively involved in genome maintenance, replication, and transcription, through finely tuned interactions with protein networks. In the present study, we identified the intermediate filament protein Vimentin as a binder with nanomolar affinity for those G-rich sequences that give rise to at least two adjacent G4 units, named G4 repeats. This interaction is supported by the N-terminal domains of soluble Vimentin tetramers. The selectivity of Vimentin for G4 repeats versus individual G4s provides an unprecedented result. Based on GO enrichment analysis performed on genes having putative G4 repeats within their core promoters, we suggest that Vimentin recruitment at these sites may contribute to the regulation of gene expression during cell development and migration, possibly by reshaping the local higher-order genome topology, as already reported for lamin B.

Indexed as

G-QuadruplexesPromoter Regions, GeneticGuanineIntermediate FilamentsTelomereVimentinGuanineVimentin

Identifiers

PMID35100428
PMCPMC8860586
OpenAlexW4207003085

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.