Evidence map›Paper›PMID 35100349›Full record

ArticleG3 (Bethesda, Md.)2022

Ankfn1-mutant vestibular defects require loss of both ancestral and derived paralogs for penetrance in zebrafish.

Kevin D Ross, Jie Ren, Ruilin Zhang, Neil C Chi, Bruce A Hamilton

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.1field-weighted citation impact, top 54% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. mWAKE in the Central Amygdala Regulates Fear Learning and Memory.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2025
    Article
  3. Rapid Detection ofBiomolecules · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Kevin D RossBiomedical Sciences Graduate Program, University of California San Diego, La Jolla, CA 92093, USA.ORCID 0000-0003-1224-3950
Jie RenDepartment of Medicine, University of California San Diego, La Jolla, CA 92093, USA.ORCID 0000-0003-0464-9096
Ruilin ZhangDepartment of Medicine, University of California San Diego, La Jolla, CA 92093, USA.ORCID 0000-0002-6594-450X
Neil C ChiBiomedical Sciences Graduate Program, University of California San Diego, La Jolla, CA 92093, USA.ORCID 0000-0003-2324-3796
Bruce A HamiltonBiomedical Sciences Graduate Program, University of California San Diego, La Jolla, CA 92093, USA.ORCID 0000-0001-5599-9139
University of California San Diego · US

Funding

Training Program in Basic Clinical GeneticsT32GM008666 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HAMILTON, BRUCE A · 1998 to 2021
$8.6M
Zfp423 Mechanisms in Joubert Syndrome and Related DisordersR01NS097534 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BRUCE A HAMILTON · 2017 to 2026
$4.5M
Genetic Modifier Activity and Network Properties of Nxf1R01GM086912 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HAMILTON, BRUCE A · 2010 to 2020
$2.9M
Mechanisms of Posterior Heart Field DevelopmentR01HL152721 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CHI, NEIL C · 2020 to 2023
$2.0M
Mechanisms of Ventricular Wall MorphogenesisR01HL141508 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CHI, NEIL C · 2018 to 2021
$1.9M
NHLBI NIH HHS R01 HL141508NHLBI NIH HHS R01 HL152721NIGMS NIH HHS R01 GM086912NIGMS NIH HHS T32 GM008666NINDS NIH HHS R01 NS097534
6 · The paper itself

Abstract

How and to what degree gene duplication events create regulatory innovation, redundancy, or neofunctionalization remain important questions in animal evolution and comparative genetics. Ankfn1 genes are single copy in most invertebrates, partially duplicated in jawed vertebrates, and only the derived copy retained in most mammals. Null mutations in the single mouse homolog have vestibular and neurological abnormalities. Null mutation of the single Drosophila homolog is typically lethal with severe sensorimotor deficits in rare survivors. The functions and potential redundancy of paralogs in species with two copies are not known. Here, we define a vestibular role for Ankfn1 homologs in zebrafish based on the simultaneous disruption of each locus. Zebrafish with both paralogs disrupted showed vestibular defects and early lethality from swim bladder inflation failure. One intact copy at either locus was sufficient to prevent major phenotypes. Our results show that vertebrate Ankfn1 genes are required for vestibular-related functions, with at least partial redundancy between ancestral and derived paralogs.

Indexed as

Evolution, MolecularZebrafishAnimalsGene DuplicationMiceOrganogenesisPenetrancePhylogenyAnkfn1Ankfn1-likeBanderuoladomain architecturenmf9paralogypenetrancewide awake

Identifiers

PMID35100349
PMCPMC9210315
OpenAlexW4200434406

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.