Evidence map›Paper›PMID 35099570›Full record

ArticleChromosoma2022

Satellitome analysis illuminates the evolution of ZW sex chromosomes of Triportheidae fishes (Teleostei: Characiformes).

Rafael Kretschmer, Caio Augusto Gomes Goes, Luiz Antônio Carlos Bertollo, Tariq Ezaz, Fábio Porto-Foresti, Gustavo Akira Toma, Ricardo Utsunomia, Marcelo de Bello Cioffi

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In one paragraph

Article in Chromosoma, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
8.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Emergence of satellite DNAs suggests centromeric repositioning as a driver of karyotypic variation of the freshwater darter characines (Apareiodon affinis).Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2026
    Article
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  5. Repeatome Dynamics and Sex Chromosome Differentiation in the XY and XYInternational journal of molecular sciences · 2025
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  15. Fast satellite DNA evolution in Nothobranchius annual killifishes.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2023
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  19. Review
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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Rafael Kretschmer *Departamento de Genética e Evolução, Universidade Federal de São Carlos, São Carlos, São Paulo, Brazil.ORCID http://orcid.org/0000-0002-6856-2152
Caio Augusto Gomes Goes *Faculdade de Ciências, UNESP, Bauru, São Paulo, Brazil.
Luiz Antônio Carlos BertolloDepartamento de Genética e Evolução, Universidade Federal de São Carlos, São Carlos, São Paulo, Brazil.
Tariq EzazInstitute for Applied Ecology, University of Canberra, Canberra, Australia.
Fábio Porto-ForestiFaculdade de Ciências, UNESP, Bauru, São Paulo, Brazil.
Gustavo Akira TomaDepartamento de Genética e Evolução, Universidade Federal de São Carlos, São Carlos, São Paulo, Brazil.
Ricardo Utsunomia *Instituto de Ciências Biológicas e da Saúde, ICBS, Universidade Federal Rural do Rio de Janeiro, Rio de Janeiro, Brazil.
Marcelo de Bello Cioffi *Departamento de Genética e Evolução, Universidade Federal de São Carlos, São Carlos, São Paulo, Brazil. mbcioffi@ufscar.br.ORCID http://orcid.org/0000-0003-4340-1464
Universidade Federal de São Carlos · BRUniversidade Estadual Paulista (Unesp) · BRUniversidade Federal Rural do Rio de Janeiro · BRUniversity of Canberra · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Satellites are an abundant source of repetitive DNAs that play an essential role in the chromosomal organization and are tightly linked with the evolution of sex chromosomes. Among fishes, Triportheidae stands out as the only family where almost all species have a homeologous ZZ/ZW sex chromosomes system. While the Z chromosome is typically conserved, the W is always smaller, with variations in size and morphology between species. Here, we report an analysis of the satellitome of Triportheus auritus (TauSat) by integrating genomic and chromosomal data, with a special focus on the highly abundant and female-biased satDNAs. In addition, we investigated the evolutionary trajectories of the ZW sex chromosomes in the Triportheidae family by mapping satDNAs in selected representative species of this family. The satellitome of T. auritus comprised 53 satDNA families of which 24 were also hybridized by FISH. Most satDNAs differed significantly between sexes, with 19 out of 24 being enriched on the W chromosome of T. auritus. The number of satDNAs hybridized into the W chromosomes of T. signatus and T. albus decreased to six and four, respectively, in accordance with the size of their W chromosomes. No TauSat probes produced FISH signals on the chromosomes of Agoniates halecinus. Despite its apparent conservation, our results indicate that each species differs in the satDNA accumulation on the Z chromosome. Minimum spanning trees (MSTs), generated for three satDNA families with different patterns of FISH mapping data, revealed different homogenization rates between the Z and W chromosomes. These results were linked to different levels of recombination between them. The most abundant satDNA family (TauSat01) was exclusively hybridized in the centromeres of all 52 chromosomes of T. auritus, and its putative role in the centromere evolution was also highlighted. Our results identified a high differentiation of both ZW chromosomes regarding satellites composition, highlighting their dynamic role in the sex chromosomes evolution.

Indexed as

CharaciformesAnimalsDNAEvolution, MolecularFemaleFishesGenomeGenomicsSex ChromosomesDNAFISHFishesHigh-throughput sequencingsatDNA evolutionSatellitomeSex chromosome evolution

Identifiers

PMID35099570
OpenAlexW4210401631

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.