Evidence map›Paper›PMID 35099536›Full record

ArticleMolecular biology and evolution2022

Molecular Evolution across Mouse Spermatogenesis.

Emily E K Kopania, Erica L Larson, Colin Callahan, Sara Keeble, Jeffrey M Good

Open access · goldAbstract read
In one paragraph

Article in Molecular biology and evolution, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 39 citations in OpenAlex.

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  7. Dichotomous transcriptome divergence at the cell-type level between thebioRxiv : the preprint server for biology · 2025
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  10. Reenacting a mouse genetic evolutionary arms race in yeast reveals that SLXL1/SLX compete with SLY1/2 for binding to Spindlins.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  11. Article
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  15. Review
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  17. Do genetic loci that cause reproductive isolation in the lab inhibit gene flow in nature?Evolution; international journal of organic evolution · 2024
    Article
  18. Article
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Emily E K KopaniaDivision of Biological Sciences, University of Montana, Missoula, MT, USA.ORCID 0000-0002-2710-2491
Erica L LarsonDepartment of Biological Sciences, University of Denver, Denver, CO, USA.ORCID 0000-0003-3006-645X
Colin CallahanDivision of Biological Sciences, University of Montana, Missoula, MT, USA.
Sara KeebleDivision of Biological Sciences, University of Montana, Missoula, MT, USA.ORCID 0000-0002-7318-3122
Jeffrey M GoodDivision of Biological Sciences, University of Montana, Missoula, MT, USA.ORCID 0000-0003-0707-5374
University of Montana · USUniversity of Denver · US

Funding

Molecular Histology and Fluorescent ImagingP30GM103338 · NIGMS · UNIVERSITY OF MONTANA · PI HOLIAN, ANDRIJ · 2013 to 2017
$5.6M
Meiotic sex chromosome inactivation and the developmental basis of hybrid male stR01HD073439 · NICHD · UNIVERSITY OF MONTANA · PI GOOD, JEFFREY · 2012 to 2016
$1.5M
The evolution of genomic imprintingR01HD094787 · NICHD · UNIVERSITY OF MONTANA · PI GOOD, JEFFREY · 2018 to 2022
$1.5M
NICHD NIH HHS R01 HD073439NICHD NIH HHS R01 HD094787NIGMS NIH HHS P30 GM103338
6 · The paper itself

Abstract

Genes involved in spermatogenesis tend to evolve rapidly, but we lack a clear understanding of how protein sequences and patterns of gene expression evolve across this complex developmental process. We used fluorescence-activated cell sorting (FACS) to generate expression data for early (meiotic) and late (postmeiotic) cell types across 13 inbred strains of mice (Mus) spanning ∼7 My of evolution. We used these comparative developmental data to investigate the evolution of lineage-specific expression, protein-coding sequences, and expression levels. We found increased lineage specificity and more rapid protein-coding and expression divergence during late spermatogenesis, suggesting that signatures of rapid testis molecular evolution are punctuated across sperm development. Despite strong overall developmental parallels in these components of molecular evolution, protein and expression divergences were only weakly correlated across genes. We detected more rapid protein evolution on the X chromosome relative to the autosomes, whereas X-linked gene expression tended to be relatively more conserved likely reflecting chromosome-specific regulatory constraints. Using allele-specific FACS expression data from crosses between four strains, we found that the relative contributions of different regulatory mechanisms also differed between cell types. Genes showing cis-regulatory changes were more common late in spermatogenesis, and tended to be associated with larger differences in expression levels and greater expression divergence between species. In contrast, genes with trans-acting changes were more common early and tended to be more conserved across species. Our findings advance understanding of gene evolution across spermatogenesis and underscore the fundamental importance of developmental context in molecular evolutionary studies.

Indexed as

Evolution, MolecularSpermatogenesisAnimalsGenes, X-LinkedMaleMiceTestisX Chromosomeallele-specific expressionfaster-X evolutionfluorescence activated cell sorting (FACS)gene expressionphylogenetic contrasts

Identifiers

PMID35099536
PMCPMC8844503
OpenAlexW4210732475

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.