Evidence map›Paper›PMID 35099129›Full record

ArticleJournal of applied biomedicine2022

Association between interferon-gamma (IFN-γ) gene polymorphisms (+874A/T and +2109A/G), and susceptibility to hepatitis B viral infection (HBV).

Mahmoud F Dondeti, Mohamed S Abdelkhalek, Hosam M El-Din Elezawy, Walaa F Alsanie, Bassem M Raafat, Amira M Gamal-Eldeen, Roba M Talaat

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Article in Journal of applied biomedicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

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  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Mahmoud F DondetiUniversity of Sadat City (USC), Genetic Engineering and Biotechnology Research Institute (GEBRI), Molecular Biology Department, Sadat City, Egypt.
Mohamed S AbdelkhalekUniversity of Sadat City (USC), Genetic Engineering and Biotechnology Research Institute (GEBRI), Molecular Biology Department, Sadat City, Egypt.
Hosam M El-Din ElezawyMenoufia University, National Liver Institute (NLI), Clinical Biochemistry and Molecular Diagnostics Department, Menoufia, Egypt.
Walaa F AlsanieTaif University, College of Applied Medical Sciences, Clinical Laboratory Sciences Department, Taif, Saudi Arabia.
Bassem M RaafatTaif University, College of Applied Medical Sciences, Radiological Sciences Department, Taif, Saudi Arabia.
Amira M Gamal-EldeenTaif University, College of Applied Medical Sciences, Clinical Laboratory Sciences Department, Taif, Saudi Arabia.
Roba M TalaatUniversity of Sadat City (USC), Genetic Engineering and Biotechnology Research Institute (GEBRI), Molecular Biology Department, Sadat City, Egypt.
Taif University · SAUniversity of Sadat City · EGNational Research Centre · EG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundInterferon-gamma (IFN-γ) is a chief proinflammatory cytokine with a significant role in the immune response against viral infections. Today there is increasing evidence about the association between individual genetic polymorphisms and cytokines in predicting HBV infection susceptibility.

aimThis study aimed to investigate the association between IFN-γ gene polymorphisms and susceptibility to hepatitis B viral infection (HBV), and the impact of these genetic polymorphisms on IFN-γ production. IFN-γ (+874A/T, rs2430561, and +2109A/G, rs1861494) was genotyped by single-stranded polymorphism-polymerase chain reaction (SSP-PCR) in 126 Egyptians with chronic HBV infection and in 100 healthy control subjects. The plasma levels of IFN-γ were measured by Enzyme-linked immunosorbent assay (ELISA).

resultsCompared to the control subjects there was a slight increase in +874TT genotype frequency in HBV patients. However, no statistical significance in IFN-γ (+874A/T and +2109A/G) genotype/allele distribution was demonstrated, indicating the lack of association between these SNPs and susceptibility to HBV infection. In +2109A/G, only AG genotype was observed with a complete abrogation of GG and AA genotypes. Haplotypes between different loci on selected genes showed insignificant changes in their frequency in patients and control subjects. HBV patients had a significantly higher level of IFN-γ (P < 0.001) compared to controls. The maximum significant increase in IFN-γ production was observed in subjects harboring the +874TA genotype.

conclusionsAs no association could be characterized between the polymorphism in IFN-γ (+874A/T and +2109A/G) and susceptibility to chronic HBV infection, our data support the concept that IFN-γ gene polymorphisms are not predictors of HBV susceptibility in this segment of the Egyptian population.

Indexed as

Hepatitis BHepatitis B virusGenetic Predisposition to DiseaseHumansInterferon-gammaPolymorphism, Single NucleotideIFNG protein, humanInterferon-gammaEgyptianHBVIFN-γPolymorphism

Identifiers

PMID35099129
OpenAlexW4205421374

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.