Evidence map›Paper›PMID 35098688›Full record

ArticleMicrobial biotechnology2022

Highly efficient rDNA-mediated multicopy integration based on the dynamic balance of rDNA in Saccharomyces cerevisiae.

Huihui Zheng, Kai Wang, Xiaoxiao Xu, Jing Pan, Xinhua Sun, Jin Hou, Weifeng Liu, Yu Shen

Open access · goldAbstract read
In one paragraph

Article in Microbial biotechnology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Article
  3. CRISPR-based synthetic biology toolkit development inSynthetic and systems biotechnology · 2026
    Article
  4. Efficient Introduction of Genetic Elements at Specific Insertion Loci.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. EngineeringEngineering microbiology · 2024
    Review
  10. Article
  11. Frontiers in bioengineering and biotechnology · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Huihui ZhengState Key Laboratory of Microbial Technology, Institute of Microbial Technology, Shandong University, Qingdao, China.
Kai WangState Key Laboratory of Microbial Technology, Institute of Microbial Technology, Shandong University, Qingdao, China.
Xiaoxiao XuState Key Laboratory of Microbial Technology, Institute of Microbial Technology, Shandong University, Qingdao, China.
Jing PanState Key Laboratory of Microbial Technology, Institute of Microbial Technology, Shandong University, Qingdao, China.
Xinhua SunState Key Laboratory of Microbial Technology, Institute of Microbial Technology, Shandong University, Qingdao, China.
Jin HouState Key Laboratory of Microbial Technology, Institute of Microbial Technology, Shandong University, Qingdao, China.
Weifeng LiuState Key Laboratory of Microbial Technology, Institute of Microbial Technology, Shandong University, Qingdao, China.
Yu ShenState Key Laboratory of Microbial Technology, Institute of Microbial Technology, Shandong University, Qingdao, China.ORCID 0000-0001-9306-2996
Qingdao University of Science and Technology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Engineered Saccharomyces cerevisiae strains are good cell factories, and developing additional genetic manipulation tools will accelerate construction of metabolically engineered strains. Highly repetitive rDNA sequence is one of two main sites typically used for multicopy integration of genes. Here, we developed a simple and high-efficiency strategy for rDNA-mediated multicopy gene integration based on the dynamic balance of rDNA in S. cerevisiae. rDNA copy number was decreased by pre-treatment with hydroxyurea (HU). Then, heterologous genes were integrated into the rDNA sequence. The copy number of the integrated heterologous genes increased along with restoration of the copy number of rDNA. Our results demonstrated that HU pre-treatment doubled the number of integrated gene copies; moreover, compared with removing HU stress during transformation, removing HU stress after selection of transformants had a higher probability of resulting in transformants with high-copy integrated genes. Finally, we integrated 18.0 copies of the xylose isomerase gene into the S. cerevisiae genome in a single step. This novel rDNA-mediated multicopy genome integration strategy provides a convenient and efficient tool for further metabolic engineering of S. cerevisiae.

Indexed as

Saccharomyces cerevisiaeXyloseDNA, RibosomalMetabolic EngineeringDNA, RibosomalXylose

Identifiers

PMID35098688
PMCPMC9049599
OpenAlexW4210584072

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.