Evidence map›Paper›PMID 35094293›Full record

ArticleBreast cancer (Tokyo, Japan)2022

CDC42 as an epigenetic regulator of ID4 in triple-negative breast tumors.

Daniela Nasif, Sebastian Real, María Roqué, María T Branham

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Article in Breast cancer (Tokyo, Japan), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Daniela NasifIHEM, National University of Cuyo, CONICET, Mendoza, Argentina.
Sebastian RealIHEM, National University of Cuyo, CONICET, Mendoza, Argentina.
María RoquéFaculty of Exact and Natural Sciences, IHEM, National University of Cuyo, CONICET, Mendoza, Argentina.
María T BranhamIHEM, National University of Cuyo, CONICET, Mendoza, Argentina. mtbranham@mendoza-conicet.gob.ar.ORCID http://orcid.org/0000-0003-0362-0240
Consejo Nacional de Investigaciones Científicas y Técnicas · AR

Funding

CONICET PIP 112-201301-00693
6 · The paper itself

Abstract

backgroundTriple-negative (TN) breast cancer represents a subtype of breast cancer that does not express estrogen receptor (ER), progesterone receptor (PR), or human epidermal growth factor receptor 2 (HER-2). Clinically, it is characterized by high invasiveness, high metastatic potential, and poor prognosis. Inhibitor of DNA binding 4 (ID4) has been shown to be overexpressed in these tumors acting as an oncogene responsible for many of its aggressive features. CDC42, a plasma membrane-associated small GTPase, can downregulate ID4 gene expression through hypermethylation of its promoter in colorectal adenocarcinomas. Since ID4 acts as an oncogene and is hypomethylated in TN breast tumors, here we asked whether CDC42 could also epigenetically silence ID4 and in doing so revert aggressive features of this tumor type.

methodsGene expression was retrieved from TCGA database using UCSC Xena. Association between overall survival (OS) and gene expression was assessed using Kaplan-Meier plotter. In vitro experiments involved ectopic expression of CDC42 in MDA-MB231and in MDA-MB468 breast cancer cell lines. Gene expression was analyzed by qPCR, western blot and inmunofluorescence assays and methylation by MSP, MS-MLPA, or ddMSP.

resultsData mining analysis revealed that CDC42 expression varies among breast cancer subtypes that in the basal-like subtype there is an inverse correlation between CDC42 and ID4 expression and a positive correlation between CDC42 expression and ID4 methylation. In vitro experiments revealed that CDC42 overexpression induced ID4 methylation through the activation of the EZH2 pathway. ID4 silencing produced an increase in BRCA1 expression and a less aggressive phenotype in the tested cell line.

conclusionWe show that CDC42 silences ID4 through methylation in TN breast cancer. Given that ID4 acts as an oncogene in these tumors, we think that finding an epigenetic regulator of ID4 contributes to the research and clinical management of TN breast tumors.

Indexed as

Breast NeoplasmsTriple Negative Breast Neoplasmscdc42 GTP-Binding ProteinDNA MethylationEpigenesis, GeneticFemaleGene Expression Regulation, NeoplasticHumansInhibitor of Differentiation ProteinsPromoter Regions, GeneticReceptors, Estrogencdc42 GTP-Binding ProteinCDC42 protein, humanID4 protein, humanInhibitor of Differentiation ProteinsReceptors, EstrogenCDC42ID4MethylationMolecular breast cancer subtypesTriple-negative breast cancer

Identifiers

PMID35094293
OpenAlexW4210801475

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.