Evidence map›Paper›PMID 35094009›Full record

ArticleOncogene2022

SMARCA4 biology in alveolar rhabdomyosarcoma.

Narendra Bharathy, Megan M Cleary, Jin-Ah Kim, Kiyo Nagamori, Kenneth A Crawford, Eric Wang, Debarya Saha, Teagan P Settelmeyer, Reshma Purohit, Damianos Skopelitis and 13 more

Open access · greenAbstract read
In one paragraph

Article in Oncogene, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 16 citations in OpenAlex.

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  5. Case Report: FAPFrontiers in immunology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 6 institutions in 4 countries.

Narendra Bharathy *Children's Cancer Therapy Development Institute, Beaverton, OR, 97005, USA.
Megan M Cleary *Children's Cancer Therapy Development Institute, Beaverton, OR, 97005, USA.
Jin-Ah KimChildren's Cancer Therapy Development Institute, Beaverton, OR, 97005, USA.
Kiyo NagamoriChildren's Cancer Therapy Development Institute, Beaverton, OR, 97005, USA.
Kenneth A CrawfordChildren's Cancer Therapy Development Institute, Beaverton, OR, 97005, USA.
Eric WangCold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA.
Debarya SahaChildren's Cancer Therapy Development Institute, Beaverton, OR, 97005, USA.
Teagan P SettelmeyerChildren's Cancer Therapy Development Institute, Beaverton, OR, 97005, USA.
Reshma PurohitChildren's Cancer Therapy Development Institute, Beaverton, OR, 97005, USA.
Damianos SkopelitisCold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA.
Kenneth ChangCold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA.
Jessica A DoranChildren's Cancer Therapy Development Institute, Beaverton, OR, 97005, USA.
C Ward KirschbaumChildren's Cancer Therapy Development Institute, Beaverton, OR, 97005, USA.
Suriya BharathyChildren's Cancer Therapy Development Institute, Beaverton, OR, 97005, USA.
Davis W CrewsChildren's Cancer Therapy Development Institute, Beaverton, OR, 97005, USA.
Matthew E RandolphChildren's Cancer Therapy Development Institute, Beaverton, OR, 97005, USA.
Anthony N KarnezisUniversity of California C Davis Medical Center, Sacramento, CA, 95817, USA.
Lisa Hudson-PriceChildren's Cancer Therapy Development Institute, Beaverton, OR, 97005, USA.
Jyotsna DhawanCSIR-CCMB, Uppal Road, Hyderabad, 500007, India.ORCID http://orcid.org/0000-0001-7117-7418
Joel E MichalekDepartment of Epidemiology and Biostatistics, University of Texas Health Science Center, San Antonio, TX, 78229, USA.
Alessio CiulliDivision of Biological Chemistry and Drug Discovery, School of Life Sciences, University of Dundee, Dundee, UK. a.ciulli@dundee.ac.uk.ORCID http://orcid.org/0000-0002-8654-1670
Christopher R VakocCold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA.
Charles KellerChildren's Cancer Therapy Development Institute, Beaverton, OR, 97005, USA. charles@cc-tdi.org.ORCID http://orcid.org/0000-0003-2505-7487
Children's Cancer Therapy Development Institute · USCold Spring Harbor Laboratory · USCentre for Cellular and Molecular Biology · INBC Cancer Agency · CAThe University of Texas Health Science Center at San Antonio · USUniversity of Dundee · GB

Funding

Single-Cell Biology Shared ResourceP30CA045508 · NCI · COLD SPRING HARBOR LABORATORY · PI John Edward Moses · 1987 to 2026
$118.9M
VIRAL TRANSACTIVATIONP01CA013106 · NCI · COLD SPRING HARBOR LABORATORY · PI William Richard McCombie · 1985 to 2026
$116.8M
Cytokine- and Satellite Cell-mediated Muscle Disease PromotionR01CA189299 · NCI · CHILDREN'S CANCER THERAPY DEVELOP/INST · PI KELLER, CHARLES · 2015 to 2019
$1.7M
Clinical & Mechanistic underpinnings to reducing PAX:FOXO1 for alveolar rhabdomyosarcomaR01CA258720 · NCI · CHILDREN'S CANCER THERAPY DEVELOP/INST · PI KELLER, CHARLES · 2021 to 2025
$1.5M
Elucidating the function of PAX3-FOXO1 in rhabdomyosarcoma with molecular reporters and next-generation genome editingR21CA245859 · NCI · COLD SPRING HARBOR LABORATORY · PI VAKOC, CHRISTOPHER · 2020 to 2021
$494k
NCI NIH HHS P01 CA013106NCI NIH HHS P30 CA045508NCI NIH HHS R01 CA189299NCI NIH HHS R01 CA258720NCI NIH HHS R21 CA245859
6 · The paper itself

Abstract

Rhabdomyosarcoma (RMS) is the most common soft tissue sarcoma in children and phenocopies a muscle precursor that fails to undergo terminal differentiation. The alveolar subtype (ARMS) has the poorest prognosis and represents the greatest unmet medical need for RMS. Emerging evidence supports the role of epigenetic dysregulation in RMS. Here we show that SMARCA4/BRG1, an ATP-dependent chromatin remodeling enzyme of the SWI/SNF complex, is prominently expressed in primary tumors from ARMS patients and cell cultures. Our validation studies for a CRISPR screen of 400 epigenetic targets identified SMARCA4 as a unique factor for long-term (but not short-term) tumor cell survival in ARMS. A SMARCA4/SMARCA2 protein degrader (ACBI-1) demonstrated similar long-term tumor cell dependence in vitro and in vivo. These results credential SMARCA4 as a tumor cell dependency factor and a therapeutic target in ARMS.

Indexed as

NeoplasmsRhabdomyosarcoma, AlveolarRhabdomyosarcoma, EmbryonalBiologyChildDNA HelicasesHumansNuclear ProteinsTranscription FactorsDNA HelicasesNuclear ProteinsSMARCA4 protein, humanTranscription Factors

Identifiers

PMID35094009
PMCPMC9985831
OpenAlexW4210566864

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.