Evidence map›Paper›PMID 35092504›Full record

ArticleMedical oncology (Northwood, London, England)2022

Immune microenvironment-related gene mapping predicts immunochemotherapy response and prognosis in diffuse large B-cell lymphoma.

Wanjun Chen, Weijie Liang, Yongjian He, Chixiang Liu, Hongtian Chen, Piao Lv, Yuan Yao, Huayou Zhou

Abstract read
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In one paragraph

Article in Medical oncology (Northwood, London, England), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Wanjun Chen *Department of Blood Transfusion, Nanfang Hospital, Southern Medical University, Guangzhou, 510515, China.
Weijie Liang *Department of Radiation Oncology, Nanfang Hospital, Southern Medical University, Guangzhou, China.
Yongjian HeDepartment of Laboratory Medicine, Nanfang Hospital, Southern Medical University, Guangzhou, China.
Chixiang LiuDepartment of Blood Transfusion, Nanfang Hospital, Southern Medical University, Guangzhou, 510515, China.
Hongtian ChenDepartment of Blood Transfusion, Nanfang Hospital, Southern Medical University, Guangzhou, 510515, China.
Piao LvDepartment of Blood Transfusion, Nanfang Hospital, Southern Medical University, Guangzhou, 510515, China.
Yuan YaoDepartment of Blood Transfusion, Nanfang Hospital, Southern Medical University, Guangzhou, 510515, China.
Huayou ZhouDepartment of Blood Transfusion, Nanfang Hospital, Southern Medical University, Guangzhou, 510515, China. zohoyo@hotmail.com.ORCID http://orcid.org/0000-0002-7447-8918
Nanfang Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Diffuse large B-cell lymphoma (DLBCL) is the most common subtype of non-Hodgkin's lymphoma (NHL). The R-CHOP immunochemotherapy regimen is the first-line treatment option for DLBCL patients and has greatly improved the prognosis of DLBCL, making it a curable disease. However, drug resistance or relapse is the main challenge for current DLBCL treatment. Studies have shown that the tumor microenvironment plays an important role in the onset, development, and responsiveness to drugs in DLBCL. Here, we used the CIBERSORT algorithm to resolve the composition of the immune microenvironment of 471 DLBCL patients from the GEO database. We found that activated memory CD4+ T cells and γδ T cells were significantly associated with immunochemotherapy response. Weighted gene co-expression networks (WGCNA) were constructed using differentially expressed genes from immunochemotherapy responders and non-responders. The module most associated with these two types of T cells was defined as hub module. Enrichment analysis of the hub module showed that baseline immune status was significantly stronger in responders than in non-responders. A protein-protein interaction (PPI) network was constructed for hub module to identify hub genes. After survival analysis, five prognosis-related genes (CD3G, CD3D, GNB4, FCHO2, GPR183) were identified and all these genes were significantly negatively associated with PD1. Using our own patient cohort, we validated the efficacy of CD3G and CD3D in predicting immunochemotherapy response. Our study showed that CD3G, CD3D, GNB4, FCHO2, and GPR183 are involved in the regulation of the immune microenvironment of DLBCL. They can be used as biomarkers for predicting immunochemotherapy response and potential therapeutic targets in DLBCL.

Indexed as

Antineoplastic Combined Chemotherapy ProtocolsBiomarkers, TumorCD4-Positive T-LymphocytesFemaleGene Expression Regulation, NeoplasticGenetic TestingHumansImmunotherapyLymphoma, Large B-Cell, DiffuseMaleMiddle AgedPrognosisProtein Interaction MapsTumor MicroenvironmentBiomarkers, TumorBioinformaticsDiffuse large B-cell lymphomaImmune microenvironmentImmunochemotherapy responsePrognosis

Identifiers

PMID35092504
OpenAlexW4210525831

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.