Evidence map›Paper›PMID 35091571›Full record

ArticleNPJ genomic medicine2022

Oligonucleotide correction of an intronic TIMMDC1 variant in cells of patients with severe neurodegenerative disorder.

Raman Kumar, Mark A Corbett, Nicholas J C Smith, Daniella H Hock, Zoya Kikhtyak, Liana N Semcesen, Atsushi Morimoto, Sangmoon Lee, David A Stroud, Joseph G Gleeson and 2 more

Open access · goldAbstract read
In one paragraph

Article in NPJ genomic medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. RegulatingMolecular therapy. Nucleic acids · 2024
    Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 2 countries.

Raman KumarAdelaide Medical School and the Robinson Research Institute, University of Adelaide, Adelaide, 5000, SA, Australia.
Mark A CorbettAdelaide Medical School and the Robinson Research Institute, University of Adelaide, Adelaide, 5000, SA, Australia.ORCID http://orcid.org/0000-0001-9298-3072
Nicholas J C SmithAdelaide Medical School and the Robinson Research Institute, University of Adelaide, Adelaide, 5000, SA, Australia.
Daniella H HockDepartment of Biochemistry and Pharmacology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, 3052, VIC, Australia.ORCID http://orcid.org/0000-0002-6940-4420
Zoya KikhtyakDame Roma Mitchell Cancer Research Laboratories, Adelaide Medical School, University of Adelaide, Adelaide, 5000, SA, Australia.ORCID http://orcid.org/0000-0002-3472-6067
Liana N SemcesenDepartment of Biochemistry and Pharmacology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, 3052, VIC, Australia.ORCID http://orcid.org/0000-0002-1642-0603
Atsushi MorimotoAdelaide Medical School and the Robinson Research Institute, University of Adelaide, Adelaide, 5000, SA, Australia.
Sangmoon LeeNeurogenetics Laboratory, Institute for Genomic Medicine and Departments of Neurosciences and Paediatrics, University of California, San Diego, 92093, CA, USA.
David A StroudDepartment of Biochemistry and Pharmacology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, 3052, VIC, Australia.ORCID http://orcid.org/0000-0002-2048-3383
Joseph G GleesonNeurogenetics Laboratory, Institute for Genomic Medicine and Departments of Neurosciences and Paediatrics, University of California, San Diego, 92093, CA, USA.
Eric A HaanAdult Genetics Unit, Royal Adelaide Hospital and Faculty of Health and Medical Sciences, University of Adelaide, Adelaide, 5000, SA, Australia.
Jozef GeczAdelaide Medical School and the Robinson Research Institute, University of Adelaide, Adelaide, 5000, SA, Australia. jozef.gecz@adelaide.edu.au.ORCID http://orcid.org/0000-0002-7884-6861
The University of Adelaide · AUThe University of Melbourne · AUUniversity of California San Diego · USRoyal Adelaide Hospital · AURoyal Children's Hospital · AUWomen's and Children's Health Network · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

TIMMDC1 encodes the Translocase of Inner Mitochondrial Membrane Domain-Containing protein 1 (TIMMDC1) subunit of complex I of the electron transport chain responsible for ATP production. We studied a consanguineous family with two affected children, now deceased, who presented with failure to thrive in the early postnatal period, poor feeding, hypotonia, peripheral neuropathy and drug-resistant epilepsy. Genome sequencing data revealed a known, deep intronic pathogenic variant TIMMDC1 c.597-1340A>G, also present in gnomAD (~1/5000 frequency), that enhances aberrant splicing. Using RNA and protein analysis we show almost complete loss of TIMMDC1 protein and compromised mitochondrial complex I function. We have designed and applied two different splice-switching antisense oligonucleotides (SSO) to restore normal TIMMDC1 mRNA processing and protein levels in patients' cells. Quantitative proteomics and real-time metabolic analysis of mitochondrial function on patient fibroblasts treated with SSOs showed restoration of complex I subunit abundance and function. SSO-mediated therapy of this inevitably fatal TIMMDC1 neurologic disorder is an attractive possibility.

Identifiers

PMID35091571
PMCPMC8799713
OpenAlexW4210592088

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.