Evidence map›Paper›PMID 35091422›Full record

ArticleLife science alliance2022

Refining the domain architecture model of the replication origin firing factor Treslin/TICRR.

Pedro Ferreira, Luis Sanchez-Pulido, Anika Marko, Chris P Ponting, Dominik Boos

Open access · goldAbstract read
In one paragraph

Article in Life science alliance, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Pedro FerreiraMolecular Genetics II, Centre for Medical Biotechnology, University of Duisburg-Essen, Essen, Germany pedro.ferreira@uni-due.de.ORCID 0000-0002-2336-2317
Luis Sanchez-PulidoMedical Research Council Human Genetics Unit, Institute of Genetics and Cancer, University of Edinburgh, Edinburgh, UK.
Anika MarkoMolecular Genetics II, Centre for Medical Biotechnology, University of Duisburg-Essen, Essen, Germany.
Chris P PontingMedical Research Council Human Genetics Unit, Institute of Genetics and Cancer, University of Edinburgh, Edinburgh, UK.ORCID 0000-0003-0202-7816
Dominik BoosMolecular Genetics II, Centre for Medical Biotechnology, University of Duisburg-Essen, Essen, Germany dominik.boos@uni-due.de.ORCID 0000-0003-0018-4375
University of Duisburg-Essen · DEInstitute of Genetics and Cancer · GB

Funding

Medical Research Council MC_UU_00007/15Medical Research Council MC_UU_12008/1
6 · The paper itself

Abstract

Faithful genome duplication requires appropriately controlled replication origin firing. The metazoan origin firing regulation hub Treslin/TICRR and its yeast orthologue Sld3 share the Sld3-Treslin domain and the adjacent TopBP1/Dpb11 interaction domain. We report a revised domain architecture model of Treslin/TICRR. Protein sequence analyses uncovered a conserved Ku70-homologous β-barrel fold in the Treslin/TICRR middle domain (M domain) and in Sld3. Thus, the Sld3-homologous Treslin/TICRR core comprises its three central domains, M domain, Sld3-Treslin domain, and TopBP1/Dpb11 interaction domain, flanked by non-conserved terminal domains, the CIT (conserved in Treslins) and the C terminus. The CIT includes a von Willebrand factor type A domain. Unexpectedly, MTBP, Treslin/TICRR, and Ku70/80 share the same N-terminal domain architecture, von Willebrand factor type A and Ku70-like β-barrels, suggesting a common ancestry. Binding experiments using mutants and the Sld3-Sld7 dimer structure suggest that the Treslin/Sld3 and MTBP/Sld7 β-barrels engage in homotypic interactions, reminiscent of Ku70-Ku80 dimerization. Cells expressing Treslin/TICRR domain mutants indicate that all Sld3-core domains and the non-conserved terminal domains fulfil important functions during origin firing in human cells. Thus, metazoa-specific and widely conserved molecular processes cooperate during metazoan origin firing.

Indexed as

Carrier ProteinsCell Cycle ProteinsCyclin-Dependent KinasesDNA-Binding ProteinsDNA ReplicationHumansProtein ConformationReplication OriginStructure-Activity RelationshipCarrier ProteinsCell Cycle ProteinsCyclin-Dependent KinasesDNA-Binding ProteinsTICRR protein, human

Identifiers

PMID35091422
PMCPMC8807876
OpenAlexW4225260126

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.