Evidence map›Paper›PMID 35089916›Full record

ArticlePLoS genetics2022

The C. elegans TspanC8 tetraspanin TSP-14 exhibits isoform-specific localization and function.

Zhiyu Liu, Herong Shi, Jun Liu

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Tetraspanin TSP-12 and SUP-17/ADAM10 exhibit cell type-specific codependence for trafficking through the Golgi.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Zhiyu LiuDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York, United States of America.
Herong ShiDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York, United States of America.
Jun LiuDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York, United States of America.ORCID 0000-0001-7815-4075
Cornell University · US

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
Molecular Mechanisms Regulating and Interpreting BMP SignalingR35GM130351 · NIGMS · CORNELL UNIVERSITY · PI Jun Liu · 2019 to 2026
$4.3M
Molecular mechanisms modulating BMP signalingR01GM103869 · NIGMS · CORNELL UNIVERSITY · PI LIU, JUN · 2014 to 2017
$1.2M
Broad wavelength range Zeiss 780 NLO/confocal system for the Cornell Imaging CoreS10OD018516 · OD · CORNELL UNIVERSITY · PI ZIPFEL, WARREN R · 2014 to 2014
$834k
NIGMS NIH HHS R01 GM103869NIGMS NIH HHS R35 GM130351NIH HHS P40 OD010440NIH HHS S10 OD018516
6 · The paper itself

Abstract

Tetraspanin proteins are a unique family of highly conserved four-pass transmembrane proteins in metazoans. While much is known about their biochemical properties, the in vivo functions and distribution patterns of different tetraspanin proteins are less understood. Previous studies have shown that two paralogous tetraspanins that belong to the TspanC8 subfamily, TSP-12 and TSP-14, function redundantly to promote both Notch signaling and bone morphogenetic protein (BMP) signaling in C. elegans. TSP-14 has two isoforms, TSP-14A and TSP-14B, where TSP-14B has an additional 24 amino acids at its N-terminus compared to TSP-14A. By generating isoform specific knock-ins and knock-outs using CRISPR, we found that TSP-14A and TSP-14B share distinct as well as overlapping expression patterns and functions. While TSP-14A functions redundantly with TSP-12 to regulate body size and embryonic and vulva development, TSP-14B primarily functions redundantly with TSP-12 to regulate postembryonic mesoderm development. Importantly, TSP-14A and TSP-14B exhibit distinct subcellular localization patterns. TSP-14A is localized apically and on early and late endosomes. TSP-14B is localized to the basolateral cell membrane. We further identified a di-leucine motif within the N-terminal 24 amino acids of TSP-14B that serves as a basolateral membrane targeting sequence, and showed that the basolateral membrane localization of TSP-14B is important for its function. Our work highlights the diverse and intricate functions of TspanC8 tetraspanins in C. elegans, and demonstrates the importance of dissecting the functions of these important proteins in an intact living organism.

Indexed as

Alternative SplicingAmino Acid SequenceAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsEndosomesGene Expression Regulation, DevelopmentalGene Knock-In TechniquesGene Knockout TechniquesProtein IsoformsTetraspaninsCaenorhabditis elegans ProteinsProtein IsoformsTetraspaninsTSP-12 protein, C elegansTSP-14 protein, C elegans

Identifiers

PMID35089916
PMCPMC8827444
OpenAlexW4226208378

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.