Evidence map›Paper›PMID 35088377›Full record

ArticleMolecular biology reports2022

MYB-6 and LDOX-1 regulated accretion of anthocyanin response to cold stress in purple black carrot (Daucus carota L.).

Niyaz A Dar, Mudasir A Mir, Javid I Mir, Sheikh Mansoor, Wasia Showkat, Tasmeen J Parihar, Syed Anam Ul Haq, Shabir H Wani, Gul Zaffar, Khalid Z Masoodi

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In one paragraph

Article in Molecular biology reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 24 citations in OpenAlex.

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  12. Genome-wide identification of theFrontiers in plant science · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Niyaz A DarTranscriptomics Laboratory (K-Lab), Division of Plant Biotechnology, SKUAST-Kashmir, Shalimar, Srinagar, Jammu and Kashmir, 190025, India.
Mudasir A MirTranscriptomics Laboratory (K-Lab), Division of Plant Biotechnology, SKUAST-Kashmir, Shalimar, Srinagar, Jammu and Kashmir, 190025, India.
Javid I MirCentral Institute of Temperate Horticulture, Rangreth, Srinagar, Jammu and Kashmir, 191132, India.
Sheikh MansoorTranscriptomics Laboratory (K-Lab), Division of Plant Biotechnology, SKUAST-Kashmir, Shalimar, Srinagar, Jammu and Kashmir, 190025, India.
Wasia ShowkatTranscriptomics Laboratory (K-Lab), Division of Plant Biotechnology, SKUAST-Kashmir, Shalimar, Srinagar, Jammu and Kashmir, 190025, India.
Tasmeen J PariharTranscriptomics Laboratory (K-Lab), Division of Plant Biotechnology, SKUAST-Kashmir, Shalimar, Srinagar, Jammu and Kashmir, 190025, India.
Syed Anam Ul HaqTranscriptomics Laboratory (K-Lab), Division of Plant Biotechnology, SKUAST-Kashmir, Shalimar, Srinagar, Jammu and Kashmir, 190025, India.
Shabir H WaniMountain Research Centre for Field Crops, SKUAST-Kashmir, Khudwani, Jammu and Kashmir, 192101, India.
Gul ZaffarDivision of Plant Breeding & Genetics, SKUAST-Kashmir, Shalimar, Srinagar, Jammu and Kashmir, 190025, India.
Khalid Z MasoodiTranscriptomics Laboratory (K-Lab), Division of Plant Biotechnology, SKUAST-Kashmir, Shalimar, Srinagar, Jammu and Kashmir, 190025, India. masoodikz@skuastkashmir.ac.in.ORCID http://orcid.org/0000-0002-4889-5558
Sher-e-Kashmir University of Agricultural Sciences and Technology of Kashmir · INCentral Institute of Temperate Horticulture · IN

Funding

Science and Engineering Research Board ECRA/2016/000025Science and Engineering Research Board EMR/2016/005598
6 · The paper itself

Abstract

aimAnthocyanin, an essential ingredient of functional foods, is present in a wide range of plants, including black carrots. The current investigation was carried out to analyse the effect of cold stress on the expression of major anthocyanins and anthocyanin biosynthetic pathway genes, MYB6 and LDOX-1. METHODS AND

resultsFive cultivated carrot genotypes belonging to the eastern group, having anthocyanin pigment, were used in the current study. The qRT-PCR analysis revealed that relative gene expression of transcription factor MYB-6 and LDOX1gene was highly expressed upon cold stress compared to non-stress samples. High-performance liquid chromatography-based quantification of Cyanidin 3-O-glucoside (Kuromanin chloride), Ferulic acid, 3,5-Dimethoxy-4-hydroxycinnamic acid (Sinapic acid), and Rutin revealed a significant increase in these major anthocyanins in response to cold stress when compared to control plants.

conclusionWe conclude that MYB6 and LDOX1 gene expression increases upon cold stress, which induces accumulation of major anthocyanins in purple black carrot and suggests a possible cross-link between cold stress and anthocyanin biosynthesis in purple black carrot.

Indexed as

Daucus carotaAnthocyaninsCold-Shock ResponseGene Expression Regulation, PlantPlant ProteinsAnthocyaninsPlant ProteinsAnthocyaninsCold stressDaucus CarotaGene expressionHPLC

Identifiers

PMID35088377
OpenAlexW4210466139

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.