Evidence map›Paper›PMID 35087586›Full record

ArticleJournal of oncology2022

Comprehensive Analysis of Pyroptosis-Related Long Noncoding RNA Immune Infiltration and Prediction of Prognosis in Patients with Colon Cancer.

Li Liu, Wenzheng Chen, Yebei Li, Pengcheng Fu, Yi Cao, Zhengrong Li, Jianbo Xiong, Zhigang Jie

Abstract read
In one paragraph

Article in Journal of oncology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Li LiuDepartment of Gastrointestinal Surgery, The First Affiliated Hospital of Nanchang University, Nanchang, China.
Wenzheng ChenDepartment of Gastrointestinal Surgery, The First Affiliated Hospital of Nanchang University, Nanchang, China.
Yebei LiThe Second Affiliated Hospital of Nanchang University, Nanchang, China.
Pengcheng FuDepartment of Gastrointestinal Surgery, The First Affiliated Hospital of Nanchang University, Nanchang, China.
Yi CaoDepartment of Gastrointestinal Surgery, The First Affiliated Hospital of Nanchang University, Nanchang, China.
Zhengrong LiDepartment of Gastrointestinal Surgery, The First Affiliated Hospital of Nanchang University, Nanchang, China.
Jianbo XiongDepartment of Gastrointestinal Surgery, The First Affiliated Hospital of Nanchang University, Nanchang, China.ORCID https://orcid.org/0000-0003-2977-3798
Zhigang JieDepartment of Gastrointestinal Surgery, The First Affiliated Hospital of Nanchang University, Nanchang, China.ORCID https://orcid.org/0000-0002-6369-7306

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Colon cancer (CC) is one of the most prevalent malignant tumours of the alimentary canal. It is unclear whether pyroptosis-related lncRNA expression is correlated with CC prognosis. We discovered 20 pyroptosis-related lncRNAs that were expressed differently in CC and normal colon tissues in our investigation. Based on differentially expressed genes (DEGs), we grouped all CC patients into two categories (Clusters 1 and 2). Cluster 1 was shown to be connected with a higher overall survival rate, upregulated expression of immune checkpoints, higher immunoscores, higher estimated scores, and immune cell infiltration. Using data from the Cancer Genome Atlas (TCGA), to create a multigene signature, the predictive significance of each lncRNA linked with pyroptosis for survival was assessed. A 9-lncRNA signature was established using the least absolute shrinkage and selection operator (LASSO) Cox regression method, and all CC patients in the TCGA cohort were classified into low-risk or high-risk groups. The low-risk CC patients had a much greater chance of survival than those in the high-risk group. The risk score is an independent prognostic indicator for predicting survival. In addition, risk characteristics are linked to immune characteristics. In summary, pyroptosis-related lncRNAs can be used to predict CC prognosis and participate in tumour immunity.

Identifiers

PMID35087586
PMCPMC8789477

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.