Evidence map›Paper›PMID 35087323›Full record

ArticleBreeding science2021

Parentage analysis of tea cultivars in Japan based on simple sequence repeat markers.

Nakao Kubo, Tomohiro Matsuda, Chisaki Yanagida, Yuna Hotta, Yutaka Mimura, Maho Kanda

Abstract read
In one paragraph

Article in Breeding science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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2citing papers in PubMed
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1 · What the graph read from it

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Genome Survey and SSR Analysis ofGenetics research · 2022
    Article
4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Nakao KuboGraduate School of Life and Environmental Sciences, Kyoto Prefectural University, 1-5 Hangi-cho, Shimogamo, Sakyo-ku, Kyoto 606-8522, Japan.
Tomohiro MatsudaTea Industry Research Division, Agriculture and Forestry Technology Department, Kyoto Prefectural Agriculture, Forestry and Fisheries Technology Center, 1 Nakanosono, Shirakawa, Uji, Kyoto 611-0022, Japan.
Chisaki YanagidaGraduate School of Life and Environmental Sciences, Kyoto Prefectural University, 1-5 Hangi-cho, Shimogamo, Sakyo-ku, Kyoto 606-8522, Japan.
Yuna HottaTea Industry Research Division, Agriculture and Forestry Technology Department, Kyoto Prefectural Agriculture, Forestry and Fisheries Technology Center, 1 Nakanosono, Shirakawa, Uji, Kyoto 611-0022, Japan.
Yutaka MimuraBiotechnology Research Department, Kyoto Prefectural Agriculture, Forestry and Fisheries Technology Center, 74 Oji, Kitainayazuma, Seika-cho, Soraku-gun, Kyoto 619-0244, Japan.
Maho KandaTea Industry Research Division, Agriculture and Forestry Technology Department, Kyoto Prefectural Agriculture, Forestry and Fisheries Technology Center, 1 Nakanosono, Shirakawa, Uji, Kyoto 611-0022, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tea cultivars have been bred by individual selection of landraces and by crossbreeding, but the validation of the parentage is limited. In this study, we performed parentage analysis of 79 tea cultivars in Japan based on SSR markers to confirm or identify the parent-offspring relationships among them. The effectiveness of nine SSR markers for parentage analysis was validated by comparing them to the existing cleaved amplified polymorphic sequence markers. The former markers were detectable more alleles than the latter. Simulation of parentage analysis of the tea cultivars predicted biparental origins for 12 cultivars ('Houshun', 'Mie ryokuhou no. 1', 'Surugawase', 'Tenmyo', 'Yamanoibuki', 'Harumidori', 'Koushun', 'Minekaori', 'Okumusashi', 'Saemidori', 'Sofu', and 'Toyoka'), in the first five of which candidate parents of yet-to-be-defined pedigree were newly identified. Comparisons of a total of 41 SSR genotypes confirmed the newly-identified parentages of 'Asahi' for 'Tenmyo', 'Rokurou' for 'Houshun', 'Surugawase', and 'Yamanoibuki', and 'Yamatomidori' for 'Mie ryokuhou no. 1'. The maternity of seven cultivars out of the 12 was also confirmed with chloroplast DNA sequences. Uniparental origins were confirmed for 25 cultivars. This parentage analysis has improved our knowledge of tea pedigrees and will aid in the development of new cultivars.

Indexed as

DNA markerparentage analysispedigreesimple sequence repeat (SSR)tea (Camellia sinensis) cultivar

Identifiers

PMID35087323
PMCPMC8784347

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.