Evidence map›Paper›PMID 35086739›Full record

ArticleTrends in ecology & evolution2022

The era of reference genomes in conservation genomics.

Giulio Formenti, Kathrin Theissinger, Carlos Fernandes, Iliana Bista, Aureliano Bombarely, Christoph Bleidorn, Claudio Ciofi, Angelica Crottini, José A Godoy, Jacob Höglund and 16 more

Abstract read
In one paragraph

Article in Trends in ecology & evolution, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 178 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
178citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

178 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Genomic investigations of successful invasions: the picture emerging from recent studies.Biological reviews of the Cambridge Philosophical Society · 2025
    Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. New Mitogenomic Resources for theEcology and evolution · 2026
    Article
  18. Article
  19. Article
  20. Review

118 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors.

Giulio FormentiThe Rockefeller University, 1230 York Ave, New York, NY 10065, USA.
Kathrin TheissingerLOEWE Centre for Translational Biodiversity Genomics (LOEWE-TBG), Georg-Voigt-Str. 14-16, 60325 Frankfurt/Main, Germany; University of Koblenz-Landau, Institute for Environmental Sciences, Fortstrasse 7, 76829 Landau, Germany; Senckenberg Biodiversity and Climate Research Centre, Georg-Voigt-Str. 14-16, 60325 Frankfurt/Main, Germany.
Carlos FernandesCE3C - Centre for Ecology, Evolution and Environmental Changes, Departamento de Biologia Animal, Faculdade de Ciências, Universidade de Lisboa, 1749-016 Lisboa, Portugal; Faculdade de Psicologia, Universidade de Lisboa, Alameda da Universidade, 1649-013 Lisboa, Portugal.
Iliana BistaUniversity of Cambridge, Department of Genetics, Cambridge CB2 3EH, UK; Wellcome Sanger Institute, CB10 1SA, Hinxton, UK.
Aureliano BombarelyUniversita degli Studi di Milano, Via Celoria 26, 20133 Milano, Italy.
Christoph BleidornUniversity of Göttingen, Department of Animal Evolution and Biodiversity, Untere Karspüle, 2, 37073, Germany.
Claudio CiofiUniversity of Florence, Department of Biology, Via Madonna del Piano 6, Sesto Fiorentino (FI) 50019, Italy.
Angelica CrottiniCIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, 4485-661 Vairão, Portugal.
José A GodoyEstación Biológica de Doñana, Consejo Superior de Investigaciones Científicas, Av. Américo Vespucio, 26, 41092, Spain.
Jacob HöglundDept. of Ecology and Genetics, Uppsala University, Norbyvägen 18D, 75246, Sweden.
Joanna MalukiewiczGerman Primate Center, Kellnerweg 4, 37077 Göttingen, Germany.
Alice MoutonInBios - Conservation Genetics Lab, University of Liege, Chemin de la Vallée 4, 4000, Belgium.
Rebekah A OomenCentre for Ecological and Evolutionary Synthesis, University of Oslo, Blindernveien 31, 0371 Oslo, Norway; Centre for Coastal Research, University of Agder, Gimlemoen 25j, 4630 Kristiansand, Norway.
Sadye PaezThe Rockefeller University, 1230 York Ave, New York, NY 10065, USA.
Per J PalsbøllGroningen Institute of Evolutionary Life Sciences University of Groningen Nijenborgh, 9747, AG, Groningen, the Netherlands; Center for Coastal Studies, 5 Holway Avenue, Provincetown, MA 02657, USA.
Christophe PampoulieMarine and Freshwater Research Institute, Fornubúðir, 5, 220 Hanafjörður, Iceland.
María J Ruiz-LópezEstación Biológica de Doñana, Consejo Superior de Investigaciones Científicas, Av. Américo Vespucio, 26, 41092, Spain.
Hannes SvardalDepartment of Biology, University of Antwerp, Groenenborgerlaan 171, 2020, Belgium.
Constantina TheofanopoulouThe Rockefeller University, 1230 York Ave, New York, NY 10065, USA.
Jan de VriesUniversity of Göttingen, Institute for Microbiology and Genetics, Dept. of Applied Bioinformatics, Goettingen Center for Molecular Biosciences (GZMB), Campus Institute Data Science (CIDAS), Goldschmidtstr. 1, 37077, Germany.
Ann-Marie WaldvogelInstitute of Zoology, University of Cologne, Zülpicherstrasse 47b, D-50674, Germany.
Guojie ZhangVillum Center for Biodiversity Genomics, Section for Ecology and Evolution, Department of Biology, University of Copenhagen, Denmark, Build 3, Universitetsparken 15, Copenhagen 2100, Denmark; China National Genebank, BGI-Shenzhen, Jinsha Road, Dapeng District, Shenzhen 518083, China.
Camila J MazzoniLeibniz Institute for Zoo and Wildlife Research (IZW), Alfred-Kowalke-Str 17, 10315 Berlin, Germany.
Erich D JarvisThe Rockefeller University, 1230 York Ave, New York, NY 10065, USA.
Miklós BálintLOEWE Centre for Translational Biodiversity Genomics (LOEWE-TBG), Georg-Voigt-Str. 14-16, 60325 Frankfurt/Main, Germany; Senckenberg Biodiversity and Climate Research Centre, Georg-Voigt-Str. 14-16, 60325 Frankfurt/Main, Germany; Institute for Insect Biotechnology, Justus-Liebig University Gießen, Heinrich-Buff-Ring 26-32, 35392 Giessen, Germany. Electronic address: miklos.balint@senckenberg.de.
European Reference Genome Atlas (ERGA) Consortium

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

Progress in genome sequencing now enables the large-scale generation of reference genomes. Various international initiatives aim to generate reference genomes representing global biodiversity. These genomes provide unique insights into genomic diversity and architecture, thereby enabling comprehensive analyses of population and functional genomics, and are expected to revolutionize conservation genomics.

Indexed as

GenomeGenomicsBiodiversitybiodiversity conservationconservation geneticsERGAEuropean Reference Genome Atlas

Identifiers

PMID35086739
PMCPMC13065249

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.