Evidence map›Paper›PMID 35084939›Full record

ArticleScience (New York, N.Y.)2022

A single-cell atlas of the normal and malformed human brain vasculature.

Ethan A Winkler, Chang N Kim, Jayden M Ross, Joseph H Garcia, Eugene Gil, Irene Oh, Lindsay Q Chen, David Wu, Joshua S Catapano, Kunal Raygor and 12 more

Open access · greenAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 213 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
213citing papers in PubMed, 1 pooled it
27.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

213 citing papers in PubMed, 1 synthesis or guideline pooled it, 320 citations in OpenAlex.

  1. Endovascular biopsy in neurointerventional surgery: A systematic review.Interventional neuroradiology : journal of peritherapeutic neuroradiology, surgical procedures and related neurosciences · 2026
    Pooled it
  2. Article
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  6. Review
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  10. Review
  11. Distinct single-nucleus RNA-seq changes among non-neuronal cells in ADNC, LATE-NC, and mixed pathologies.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2026
    Article
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  18. Mutant KRAS in brain endothelial cells promotes vascular inflammation and impairs vascular integrity in brain arteriovenous malformation.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2026
    Article
  19. Article
  20. Review

153 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 5 institutions in 1 country.

Ethan A Winkler *Department of Neurological Surgery, University of California, San Francisco, CA, USA.ORCID 0000-0002-7908-7107
Chang N Kim *Eli and Edythe Broad Center for Regeneration Medicine and Stem Cell Research, University of California, San Francisco, CA, USA.ORCID 0000-0001-7921-4447
Jayden M RossDepartment of Neurological Surgery, University of California, San Francisco, CA, USA.
Joseph H GarciaDepartment of Neurological Surgery, University of California, San Francisco, CA, USA.ORCID 0000-0002-7127-9534
Eugene GilDepartment of Neurological Surgery, University of California, San Francisco, CA, USA.
Irene OhRebus Biosystems, Santa Clara, CA, USA.
Lindsay Q ChenRebus Biosystems, Santa Clara, CA, USA.
David WuDepartment of Neurological Surgery, University of California, San Francisco, CA, USA.ORCID 0000-0002-9030-3667
Joshua S CatapanoDepartment of Neurosurgery, Barrow Neurological Institute, Phoenix, AZ, USA.
Kunal RaygorDepartment of Neurological Surgery, University of California, San Francisco, CA, USA.ORCID 0000-0002-5517-7706
Kazim NarsinhDepartment of Radiology and Biomedical Imaging, University of California, San Francisco, CA, USA.ORCID 0000-0002-2019-5461
Helen KimCenter for Cerebrovascular Research, Department of Anesthesia and Perioperative Care, University of California, San Francisco, CA, USA.ORCID 0000-0002-1937-354X
Shantel WeinsheimerCenter for Cerebrovascular Research, Department of Anesthesia and Perioperative Care, University of California, San Francisco, CA, USA.ORCID 0000-0001-7486-9110
Daniel L CookeWeill Institute for Neurosciences, University of California, San Francisco, CA, USA.ORCID 0000-0002-3694-413X
Brian P WalcottDepartment of Neurosurgery, NorthShore University HealthSystem, Evanston, IL, USA.
Michael T LawtonDepartment of Neurosurgery, Barrow Neurological Institute, Phoenix, AZ, USA.
Nalin GuptaDepartment of Neurological Surgery, University of California, San Francisco, CA, USA.
Berislav V ZlokovicDepartment of Physiology and Neuroscience, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.ORCID 0000-0002-6802-8232
Edward F ChangDepartment of Neurological Surgery, University of California, San Francisco, CA, USA.ORCID 0000-0003-2480-4700
Adib A AblaDepartment of Neurological Surgery, University of California, San Francisco, CA, USA.ORCID 0000-0002-6941-2295
Daniel A LimDepartment of Neurological Surgery, University of California, San Francisco, CA, USA.ORCID 0000-0001-7221-3425
Tomasz J NowakowskiDepartment of Neurological Surgery, University of California, San Francisco, CA, USA.ORCID 0000-0003-2345-4964
University of California, San Francisco · USBarrow Neurological Institute · USNorthShore University HealthSystem · USSan Francisco VA Medical Center · USUniversity of Southern California · US

Funding

Tissue CoreP50CA097257 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Susan M Chang · 2002 to 2026
$57.4M
Vascular Contributions to Dementia and Genetic Risk Factors for Alzheimer's DiseaseP01AG052350 · NIA · UNIVERSITY OF SOUTHERN CALIFORNIA · PI Marcelo Pablo Coba · 2016 to 2026
$28.4M
USCADRC Diversity Supplement PachicanoP30AG066530 · NIA · UNIVERSITY OF SOUTHERN CALIFORNIA · PI HELENA Chang CHUI, ARTHUR W TOGA · 2020 to 2026
$27.8M
VCRC Administration UnitU54NS065705 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KIM, HELEN · 2009 to 2023
$20.8M
The Psychiatric Cell Map Initiative: Connecting Genomics, Subcellular Networks, and Higher Order PhenotypesU01MH115747 · NIMH · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KAMPMANN, MARTIN, KROGAN, NEVAN J · 2018 to 2022
$19.6M
Alzheimer's Abeta, Tau, Apolipoproteins and Blood-brain barrierR01NS034467 · NINDS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI YASSINE, HUSSEIN N · 1995 to 2024
$9.1M
PREDICTORS OF SPONTANEOUS CEREBRAL AVM HEMORRHAGER01NS034949 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KIM, HELEN · 1995 to 2017
$6.5M
Endovascular Magnetic Catheter for Interventional MRIR01EB012031 · NIBIB · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HETTS, STEVEN WILLIAM, MARTIN, ALASTAIR J · 2011 to 2021
$4.8M
Assessing Genomic, Regulatory and Transcriptional Variation at Single Nuclei Resolution in the Brains of Individuals with Autism Spectrum DisorderR01MH125516 · NIMH · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ARNOLD KRIEGSTEIN, Tomasz Nowakowski · 2021 to 2026
$3.8M
Long-term outcomes in unruptured brain arteriovenous malformation patientsR01NS099268 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KIM, HELEN · 2017 to 2021
$3.1M
Mapping Developmental Lineage Relationships in the Cerebral CortexRF1MH121268 · NIMH · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI NOWAKOWSKI, TOMASZ · 2019 to 2019
$2.1M
Understanding the neurodevelopmental role and mechanism of histone demethylase JMJD3R01NS112357 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LIM, DANIEL A · 2020 to 2024
$1.9M
NCI NIH HHS F32 CA228372NCI NIH HHS P50 CA097257NIA NIH HHS P01 AG052350NIA NIH HHS P30 AG066530NIBIB NIH HHS R01 EB012031NIMH NIH HHS R01 MH125516NIMH NIH HHS RF1 MH121268NIMH NIH HHS U01 MH115747NINDS NIH HHS R01 NS034467NINDS NIH HHS R01 NS034949NINDS NIH HHS R01 NS099268NINDS NIH HHS R01 NS112357NINDS NIH HHS U54 NS065705
6 · The paper itself

Abstract

Cerebrovascular diseases are a leading cause of death and neurologic disability. Further understanding of disease mechanisms and therapeutic strategies requires a deeper knowledge of cerebrovascular cells in humans. We profiled transcriptomes of 181,388 cells to define a cell atlas of the adult human cerebrovasculature, including endothelial cell molecular signatures with arteriovenous segmentation and expanded perivascular cell diversity. By leveraging this reference, we investigated cellular and molecular perturbations in brain arteriovenous malformations, which are a leading cause of stroke in young people, and identified pathologic endothelial transformations with abnormal vascular patterning and the ontology of vascularly derived inflammation. We illustrate the interplay between vascular and immune cells that contributes to brain hemorrhage and catalog opportunities for targeting angiogenic and inflammatory programs in vascular malformations.

Indexed as

TranscriptomeAdultBlood VesselsBrainCells, CulturedCerebral CortexCerebral HemorrhageCerebrovascular CirculationEndothelial CellsFibroblastsHumansInflammationIntracranial Arteriovenous MalformationsMonocytesMuscle, Smooth, VascularPericytes

Identifiers

PMID35084939
PMCPMC8995178
OpenAlexW4210553032

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.