Evidence map›Paper›PMID 35084488›Full record

ArticleG3 (Bethesda, Md.)2022

New resources for the Drosophila 4th chromosome: FRT101F enabled mitotic clones and Bloom syndrome helicase enabled meiotic recombination.

Samuel L Goldsmith, MaryJane Shimell, Petra Tauscher, Samantha M Daly, Osamu Shimmi, Michael B O'Connor, Stuart J Newfeld

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Samuel L GoldsmithSchool of Life Sciences, Arizona State University, Tempe, AZ 85287-4501, USA.
MaryJane ShimellDepartment of Genetics, Cell Biology and Development, University of Minnesota, Minneapolis, MN 55455, USA.ORCID 0000-0003-1378-6017
Petra TauscherInstitute of Biotechnology, University of Helsinki, Helsinki 00014, Finland.
Samantha M DalySchool of Life Sciences, Arizona State University, Tempe, AZ 85287-4501, USA.
Osamu ShimmiInstitute of Biotechnology, University of Helsinki, Helsinki 00014, Finland.ORCID 0000-0001-6341-9130
Michael B O'ConnorDepartment of Genetics, Cell Biology and Development, University of Minnesota, Minneapolis, MN 55455, USA.ORCID 0000-0002-3067-5506
Stuart J NewfeldSchool of Life Sciences, Arizona State University, Tempe, AZ 85287-4501, USA.ORCID 0000-0003-1400-7978
Arizona State University · USUniversity of Helsinki · FIUniversity of Minnesota · US

Funding

Comprehensive Resource for the Drosophila 4th chromosomeR24OD028242 · OD · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI STUART J NEWFELD · 2020 to 2026
$5.4M
Inter-organ signals regulating metabolism, physiology and developmental timingR35GM118029 · NIGMS · UNIVERSITY OF MINNESOTA · PI O'CONNOR, MICHAEL BRENDAN · 2016 to 2025
$3.8M
Leica TCS SP8 Laser Scanning Confocal MicroscopeS10OD023691 · OD · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI BALUCH, DEBRA PAGE · 2017 to 2017
$600k
Resource for marking clones on the fly 4th chromosomeR21OD024794 · OD · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI NEWFELD, STUART J · 2017 to 2018
$488k
NIGMS NIH HHS R35 GM118029NIH HHS R21 OD024794NIH HHS R24 OD028242NIH HHS S10 OD023691
6 · The paper itself

Abstract

Genes on the long arm of the Drosophila melanogaster 4th chromosome are difficult to study because the chromosome lacks mitotic and meiotic recombination. Without recombination numerous standard methods of genetic analysis are impossible. Here, we report new resources for the 4th. For mitotic recombination, we generated a chromosome with an FRT very near the centromere in 101F and a derivative that carries FRT101F with a distal ubiquitously expressed GAL80 transgene. This pair of chromosomes enables both unmarked and MARCM clones. For meiotic recombination, we demonstrate that a Bloom syndrome helicase and recombination defective double mutant genotype can create recombinant 4th chromosomes via female meiosis. All strains will be available to the community via the Bloomington Drosophila Stock Center. Additional resources for studies of the 4th are in preparation and will also be made available. The goal of the 4th Chromosome Resource Project is to accelerate the genetic analysis of protein-coding genes on the 4th, including the 44 genes with no demonstrated function. Studies of these previously inaccessible but largely conserved genes will close longstanding gaps in our knowledge of metazoan development and physiology.

Indexed as

Bloom SyndromeDrosophilaAnimalsChromosomesClone CellsDrosophila melanogasterFemaleMeiosisadult braindCORL/Fussel/SKORdILP2/dILP5MARCM

Identifiers

PMID35084488
PMCPMC8982423
OpenAlexW4210279777

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.