Evidence map›Paper›PMID 35084335›Full record

ArticleeLife2022

Gut microbial trimethylamine is elevated in alcohol-associated hepatitis and contributes to ethanol-induced liver injury in mice.

Robert N Helsley, Tatsunori Miyata, Anagha Kadam, Venkateshwari Varadharajan, Naseer Sangwan, Emily C Huang, Rakhee Banerjee, Amanda L Brown, Kevin K Fung, William J Massey and 26 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
4.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 53 citations in OpenAlex.

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  13. Research progress in the role of gut microbiota in ethanol metabolism.Zhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

36 authors at 8 institutions in 2 countries.

Robert N Helsley *Department of Cardiovascular and Metabolic Sciences, Lerner Research Institute of the Cleveland Clinic, Cleveland, United States.ORCID 0000-0001-5000-3187
Tatsunori Miyata *Department of Inflammation and Immunity, Lerner Research Institute, Cleveland Clinic, Cleveland, United States.
Anagha Kadam *Department of Cardiovascular and Metabolic Sciences, Lerner Research Institute of the Cleveland Clinic, Cleveland, United States.
Venkateshwari VaradharajanDepartment of Cardiovascular and Metabolic Sciences, Lerner Research Institute of the Cleveland Clinic, Cleveland, United States.
Naseer SangwanDepartment of Cardiovascular and Metabolic Sciences, Lerner Research Institute of the Cleveland Clinic, Cleveland, United States.
Emily C HuangDepartment of Inflammation and Immunity, Lerner Research Institute, Cleveland Clinic, Cleveland, United States.
Rakhee BanerjeeDepartment of Cardiovascular and Metabolic Sciences, Lerner Research Institute of the Cleveland Clinic, Cleveland, United States.
Amanda L BrownDepartment of Cardiovascular and Metabolic Sciences, Lerner Research Institute of the Cleveland Clinic, Cleveland, United States.
Kevin K FungDepartment of Cardiovascular and Metabolic Sciences, Lerner Research Institute of the Cleveland Clinic, Cleveland, United States.
William J MasseyDepartment of Cardiovascular and Metabolic Sciences, Lerner Research Institute of the Cleveland Clinic, Cleveland, United States.ORCID 0000-0002-2087-6048
Chase NeumannDepartment of Cardiovascular and Metabolic Sciences, Lerner Research Institute of the Cleveland Clinic, Cleveland, United States.
Danny OrabiDepartment of Cardiovascular and Metabolic Sciences, Lerner Research Institute of the Cleveland Clinic, Cleveland, United States.
Lucas J OsbornDepartment of Cardiovascular and Metabolic Sciences, Lerner Research Institute of the Cleveland Clinic, Cleveland, United States.
Rebecca C SchugarDepartment of Cardiovascular and Metabolic Sciences, Lerner Research Institute of the Cleveland Clinic, Cleveland, United States.
Megan R McMullenDepartment of Inflammation and Immunity, Lerner Research Institute, Cleveland Clinic, Cleveland, United States.
Annette BellarDepartment of Inflammation and Immunity, Lerner Research Institute, Cleveland Clinic, Cleveland, United States.
Kyle L PoulsenDepartment of Inflammation and Immunity, Lerner Research Institute, Cleveland Clinic, Cleveland, United States.
Adam KimDepartment of Inflammation and Immunity, Lerner Research Institute, Cleveland Clinic, Cleveland, United States.
Vai PathakDepartment of Quantitative Health Sciences, Lerner Research Institute, Cleveland Clinic, Cleveland, United States.
Marko MrdjenDepartment of Cardiovascular and Metabolic Sciences, Lerner Research Institute of the Cleveland Clinic, Cleveland, United States.
James T AndersonDepartment of Cardiovascular and Metabolic Sciences, Lerner Research Institute of the Cleveland Clinic, Cleveland, United States.
Belinda WillardDepartment of Cardiovascular and Metabolic Sciences, Lerner Research Institute of the Cleveland Clinic, Cleveland, United States.
Craig J McClainDepartment of Medicine, University of Louisville, Louisville, United States.
Mack MitchellDepartment of Internal Medicine, University of Texas Southwestern Medical Center, Dallas, United States.
Arthur J McCulloughCenter for Microbiome and Human Health, Lerner Research Institute, Cleveland Clinic, Cleveland, United States.
Svetlana RadaevaNational Institute on Alcohol Abuse and Alcoholism, Bethesda, United States.
Bruce BartonDepartment of Population and Quantitative Health Sciences, University of Massachusetts Medical School, Worcester, United States.ORCID 0000-0001-7878-8895
Gyongyi SzaboDepartment of Medicine, Beth Israel Deaconess Medical Center and Harvard Medical School, Boston, United States.
Srinivasan DasarathyCenter for Microbiome and Human Health, Lerner Research Institute, Cleveland Clinic, Cleveland, United States.ORCID 0000-0003-1774-0104
Jose Carlos Garcia-GarciaLife Sciences Transformative Platform Technologies, Procter & Gamble, Cincinnati, United States.
Daniel M RotroffDepartment of Quantitative Health Sciences, Lerner Research Institute, Cleveland Clinic, Cleveland, United States.
Daniela S AllendeDepartment of Anatomical Pathology, Cleveland Clinic, Cleveland, United States.
Zeneng WangDepartment of Cardiovascular and Metabolic Sciences, Lerner Research Institute of the Cleveland Clinic, Cleveland, United States.
Stanley L HazenDepartment of Cardiovascular and Metabolic Sciences, Lerner Research Institute of the Cleveland Clinic, Cleveland, United States.
Laura E NagyCenter for Microbiome and Human Health, Lerner Research Institute, Cleveland Clinic, Cleveland, United States.
Jonathan Mark BrownDepartment of Cardiovascular and Metabolic Sciences, Lerner Research Institute of the Cleveland Clinic, Cleveland, United States.ORCID 0000-0003-2708-7487
Cleveland Clinic Lerner College of Medicine · USCleveland Clinic · USNational Institute on Alcohol Abuse and Alcoholism · USProcter & Gamble (Netherlands) · NLThe University of Texas Southwestern Medical Center · USUniversity of Kentucky · USUniversity of Louisville · USUniversity of Massachusetts Chan Medical School · US

Funding

University of Massachusetts Center for Clinical Science and Translational SupplementUL1TR001453 · NCATS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI LUZURIAGA, KATHERINE F · 2015 to 2024
$39.0M
Targeting 15-PGDH in Colon Cancer Prognosis, Prediction, Treatment and PreventionP50CA150964 · NCI · CASE WESTERN RESERVE UNIVERSITY · PI MARKOWITZ, SANFORD D. · 2011 to 2022
$24.6M
Project Two - Exercise Training Decreases Alcohol Drinking by an FGF21-Dependent MechanismP50AA024333 · NIAAA · CLEVELAND CLINIC LERNER COM-CWRU · PI LAURA E. NAGY · 2016 to 2026
$19.6M
The Role of Nutrition in the Development/Progression of Alcohol-Induced Organ InjuryP50AA024337 · NIAAA · UNIVERSITY OF LOUISVILLE · PI CRAIG J. MCCLAIN · 2016 to 2026
$17.9M
Project 3: Microbiota generated aryl sulfates and secondary bile acids in cardiometabolic diseaseP01HL147823 · NHLBI · CLEVELAND CLINIC LERNER COM-CWRU · PI Stanley L Hazen · 2019 to 2026
$17.0M
Non Alcoholic Steatohepatitis Clinical Research NetworkU01DK061732 · NIDDK · CLEVELAND CLINIC LERNER COM-CWRU · PI Srinivasan Dasarathy · 2002 to 2026
$12.2M
Gut Flora Metabolism of Dietary Phosphatidylcholine and CVDR01HL103866 · NHLBI · CLEVELAND CLINIC LERNER COM-CWRU · PI HAZEN, STANLEY L · 2010 to 2023
$10.8M
Novel Therapies for Alcoholic HepatitisU01AA021893 · NIAAA · CLEVELAND CLINIC LERNER COM-CWRU · PI MCCLAIN, CRAIG J., MCCULLOUGH, ARTHUR JOSEPH · 2012 to 2017
$6.0M
Systems Genetics Dissection of Non-alcoholic SteatohepatitisR01DK117850 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Aldons Jake Lusis · 2019 to 2026
$4.6M
Integrated therapies for alcohol use and ALD (ITAALD) Network -UofL Clinical CenterU01AA026980 · NIAAA · UNIVERSITY OF LOUISVILLE · PI CRAIG J. MCCLAIN, Ashwani K Singal · 2018 to 2026
$2.9M
Novel mechanism based treatment to improve tissue injury in alcoholic hepatitisR01AA028190 · NIAAA · CLEVELAND CLINIC LERNER COM-CWRU · PI DASARATHY, SRINIVASAN, NAGY, LAURA E. · 2020 to 2024
$2.8M
Gut microbiota and metabolite interactions in atherosclerosisR01HL144651 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LUSIS, ALDONS JAKE, REY, FEDERICO E · 2019 to 2022
$2.6M
NCATS NIH HHS UL1 TR001453NCI NIH HHS P50 CA150964NCRR NIH HHS S10 RR031537NHLBI NIH HHS P01 HL147823NHLBI NIH HHS R01 HL103866NHLBI NIH HHS R01 HL130819NHLBI NIH HHS R01 HL144651NHLBI NIH HHS R56 HL141744NIAAA NIH HHS K99 AA028048NIAAA NIH HHS P50 AA024333NIAAA NIH HHS P50 AA024337NIAAA NIH HHS R00 AA028048NIAAA NIH HHS R01 AA028190NIAAA NIH HHS U01 AA021890NIAAA NIH HHS U01 AA021893NIAAA NIH HHS U01 AA026933NIAAA NIH HHS U01 AA026938NIAAA NIH HHS U01 AA026977NIAAA NIH HHS U01 AA026980NIAAA NIH HHS UH3 AA026970NIAMS NIH HHS R21 AR071046NIDDK NIH HHS R01 DK113196NIDDK NIH HHS R01 DK117850NIDDK NIH HHS R01 DK120679NIDDK NIH HHS U01 DK061732NIGMS NIH HHS R01 GM119174
6 · The paper itself

Abstract

There is mounting evidence that microbes residing in the human intestine contribute to diverse alcohol-associated liver diseases (ALD) including the most deadly form known as alcohol-associated hepatitis (AH). However, mechanisms by which gut microbes synergize with excessive alcohol intake to promote liver injury are poorly understood. Furthermore, whether drugs that selectively target gut microbial metabolism can improve ALD has never been tested. We used liquid chromatography tandem mass spectrometry to quantify the levels of microbe and host choline co-metabolites in healthy controls and AH patients, finding elevated levels of the microbial metabolite trimethylamine (TMA) in AH. In subsequent studies, we treated mice with non-lethal bacterial choline TMA lyase (CutC/D) inhibitors to blunt gut microbe-dependent production of TMA in the context of chronic ethanol administration. Indices of liver injury were quantified by complementary RNA sequencing, biochemical, and histological approaches. In addition, we examined the impact of ethanol consumption and TMA lyase inhibition on gut microbiome structure via 16S rRNA sequencing. We show the gut microbial choline metabolite TMA is elevated in AH patients and correlates with reduced hepatic expression of the TMA oxygenase flavin-containing monooxygenase 3 (FMO3). Provocatively, we find that small molecule inhibition of gut microbial CutC/D activity protects mice from ethanol-induced liver injury. CutC/D inhibitor-driven improvement in ethanol-induced liver injury is associated with distinct reorganization of the gut microbiome and host liver transcriptome. The microbial metabolite TMA is elevated in patients with AH, and inhibition of TMA production from gut microbes can protect mice from ethanol-induced liver injury.

Indexed as

Gastrointestinal MicrobiomeAnimalsBacteriaChemical and Drug Induced Liver Injury, ChronicEthanolFemaleHepatitisMethylaminesMiceMice, Inbred C57BLRandom AllocationEthanolMethylaminestrimethylaminehumanliver diseasemedicinemetabolismmicrobiomemousenutrition

Identifiers

PMID35084335
PMCPMC8853661
OpenAlexW4221058294

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.