Evidence map›Paper›PMID 35083619›Full record

ArticleJournal of digital imaging2022

Automated 2D Slice-Based Skull Stripping Multi-View Ensemble Model on NFBS and IBSR Datasets.

Anam Fatima, Tahir Mustafa Madni, Fozia Anwar, Uzair Iqbal Janjua, Nasira Sultana

Abstract read
In one paragraph

Article in Journal of digital imaging, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Anam FatimaMedical Imaging and Diagnostic Lab, National Centre of Artificial Intelligence, Park Road, Tarlai Kalan, Islamabad, 45550, Pakistan.
Tahir Mustafa MadniMedical Imaging and Diagnostic Lab, National Centre of Artificial Intelligence, Park Road, Tarlai Kalan, Islamabad, 45550, Pakistan. tahir_mustafa@comsats.edu.pk.ORCID 0000-0003-3491-0195
Fozia AnwarDepartment of Health Informatics, COMSATS University Islamabad (CUI), Park Road, Tarlai Kalan, Islamabad, 45550, Pakistan.
Uzair Iqbal JanjuaDepartment of Computer Science, COMSATS University Islamabad (CUI), Park Road, Tarlai Kalan, Islamabad, 45550, Pakistan.ORCID 0000-0003-4515-0742
Nasira SultanaRawalpindi Medical University, Rawalpindi, Pakistan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study proposed and evaluated a two-dimensional (2D) slice-based multi-view U-Net (MVU-Net) architecture for skull stripping. The proposed model fused all three TI-weighted brain magnetic resonance imaging (MRI) views, i.e., axial, coronal, and sagittal. This 2D method performed equally well as a three-dimensional (3D) model of skull stripping. while using fewer computational resources. The predictions of all three views were fused linearly, producing a final brain mask with better accuracy and efficiency. Meanwhile, two publicly available datasets-the Internet Brain Segmentation Repository (IBSR) and Neurofeedback Skull-stripped (NFBS) repository-were trained and tested. The MVU-Net, U-Net, and skip connection U-Net (SCU-Net) architectures were then compared. For the IBSR dataset, compared to U-Net and SC-UNet, the MVU-Net architecture attained better mean dice score coefficient (DSC), sensitivity, and specificity, at 0.9184, 0.9397, and 0.9908, respectively. Similarly, the MVU-Net architecture achieved better mean DSC, sensitivity, and specificity, at 0.9681, 0.9763, and 0.9954, respectively, than the U-Net and SC-UNet for the NFBS dataset.

Indexed as

Image Processing, Computer-AssistedNeurofeedbackHumansInternetMagnetic Resonance ImagingSkullBrain extractionConventional methodsDeep-learning methodsInternet Brain Segmentation RepositoryMagnetic resonance imagingNeurofeedbackSkull-strippedSkull-stripping methods

Identifiers

PMID35083619
PMCPMC8921359

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.