Evidence map›Paper›PMID 35083512›Full record

ArticleAnalytical and bioanalytical chemistry2022

Sequential lipidomic, metabolomic, and proteomic analyses of serum, liver, and heart tissue specimens from peroxisomal biogenesis factor 11α knockout mice.

Vannuruswamy Garikapati, Claudia Colasante, Eveline Baumgart-Vogt, Bernhard Spengler

Open access · hybridAbstract read
In one paragraph

Article in Analytical and bioanalytical chemistry, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 27 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. The peroxisome: an update on mysteries 3.0.Histochemistry and cell biology · 2024
    Review
  9. Article
  10. Proteome of monocled cobra (Saudi pharmaceutical journal : SPJ : the official publication of the Saudi Pharmaceutical Society · 2023
    Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Vannuruswamy GarikapatiInstitute of Inorganic and Analytical Chemistry, Justus Liebig University Giessen, 35392, Giessen, Germany.ORCID http://orcid.org/0000-0003-1204-349X
Claudia ColasanteInstitute for Anatomy and Cell Biology II, Division of Medical Cell Biology, Justus Liebig University Giessen, 35392, Giessen, Germany.ORCID http://orcid.org/0000-0002-5760-4919
Eveline Baumgart-VogtInstitute for Anatomy and Cell Biology II, Division of Medical Cell Biology, Justus Liebig University Giessen, 35392, Giessen, Germany. Eveline.Baumgart-Vogt@anatomie.med.uni-giessen.de.ORCID http://orcid.org/0000-0002-8265-3763
Bernhard SpenglerInstitute of Inorganic and Analytical Chemistry, Justus Liebig University Giessen, 35392, Giessen, Germany. Bernhard.Spengler@anorg.chemie.uni-giessen.de.ORCID http://orcid.org/0000-0003-0179-5653
Justus-Liebig-Universität Gießen · DE

Funding

Deutsche Forschungsgemeinschaft INST 162/500-1 FUGGDeutsche Forschungsgemeinschaft Sp 314/13-1Deutscher Akademischer Austauschdienst 91566181Deutscher Akademischer Austauschdienst GSSP-2015Justus Liebig Universität Gießen Medical faculty LOM
6 · The paper itself

Abstract

Peroxisomes are versatile single membrane-enclosed cytoplasmic organelles, involved in reactive oxygen species (ROS) and lipid metabolism and diverse other metabolic processes. Peroxisomal disorders result from mutations in Pex genes-encoded proteins named peroxins (PEX proteins) and single peroxisomal enzyme deficiencies. The PEX11 protein family (α, β, and γ isoforms) plays an important role in peroxisomal proliferation and fission. However, their specific functions and the metabolic impact caused by their deficiencies have not been precisely characterized. To understand the systemic molecular alterations caused by peroxisomal defects, here we utilized untreated peroxisomal biogenesis factor 11α knockout (Pex11α KO) mouse model and performed serial relative-quantitative lipidomic, metabolomic, and proteomic analyses of serum, liver, and heart tissue homogenates. We demonstrated significant specific changes in the abundances of multiple lipid species, polar metabolites, and proteins and dysregulated metabolic pathways in distinct biological specimens of the Pex11α KO adult mice in comparison to the wild type (WT) controls. Overall, the present study reports comprehensive semi-quantitative molecular omics information of the Pex11α KO mice, which might serve in the future as a reference for a better understanding of the roles of Pex11α and underlying pathophysiological mechanisms of peroxisomal biogenesis disorders.

Indexed as

LipidomicsProteomicsAnimalsLiverMembrane ProteinsMiceMice, KnockoutMembrane ProteinsLipidomicsMass spectrometryMetabolomicsPeroxisomal biogenesis disordersPeroxisomesProteomics

Identifiers

PMID35083512
PMCPMC8821073
OpenAlexW4210493986

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.