Evidence map›Paper›PMID 35078938›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2022

Cellular homologs of the double jelly-roll major capsid proteins clarify the origins of an ancient virus kingdom.

Mart Krupovic, Kira S Makarova, Eugene V Koonin

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
8.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Exploring the protein universe with distant similarity detection methods.Protein science : a publication of the Protein Society · 2026
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. The polinton-like supergroup of viruses: evolution, molecular biology, and taxonomy.Microbiology and molecular biology reviews : MMBR · 2024
    Review
  13. Article
  14. Article
  15. Article
  16. Widespread Horizontal Gene Transfer Among Animal Viruses.bioRxiv : the preprint server for biology · 2024
    Article
  17. Review
  18. Article
  19. Article
  20. UnveilingISME communications · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Mart KrupovicArchaeal Virology Unit, Institut Pasteur, Université de Paris, F-75015 Paris, France; mart.krupovic@pasteur.fr koonin@ncbi.nlm.nih.gov.
Kira S MakarovaNational Center for Biotechnology Information, National Library of Medicine, Bethesda, MD 20894.ORCID 0000-0002-8174-2844
Eugene V KooninNational Center for Biotechnology Information, National Library of Medicine, Bethesda, MD 20894 mart.krupovic@pasteur.fr koonin@ncbi.nlm.nih.gov.ORCID 0000-0003-3943-8299
National Center for Biotechnology Information · USInstitut Pasteur · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Viruses are a distinct type of replicators that encode structural proteins encasing virus genomes in virions. For some of the widespread virus capsid proteins and other major components of virions, likely ancestors encoded by cellular life forms are identifiable. In particular, one of the most common capsid proteins, with the single jelly-roll (SJR) fold, appears to have evolved from a particular family of cellular carbohydrate-binding proteins. However, the double jelly-roll major capsid protein (DJR-MCP), the hallmark of the enormously diverse viruses of the kingdom

Indexed as

Capsid ProteinsDNADNA VirusesGenome, ViralVirionVirusesCapsid ProteinsDNAexaptationorigin and evolution of virusessingle and double jelly rollvirus capsid proteinsvirus taxonomy

Identifiers

PMID35078938
PMCPMC8812541
OpenAlexW4210399412

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.