Evidence map›Paper›PMID 35078489›Full record

ArticleVirology journal2022

The PB1 gene from H9N2 avian influenza virus showed high compatibility and increased mutation rate after reassorting with a human H1N1 influenza virus.

Hongrui Cui, Guangsheng Che, Mart C M de Jong, Xuesong Li, Qinfang Liu, Jianmei Yang, Qiaoyang Teng, Zejun Li, Nancy Beerens

Open access · goldAbstract read
In one paragraph

Article in Virology journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Hongrui CuiShanghai Veterinary Research Institute, Chinese Academy of Agriculture Sciences, Office Room D301, Ziyue Road 518, Minhang District, Shanghai, 200241, China.
Guangsheng CheShanghai Veterinary Research Institute, Chinese Academy of Agriculture Sciences, Office Room D301, Ziyue Road 518, Minhang District, Shanghai, 200241, China.
Mart C M de JongQuantitative Veterinary Epidemiology, Animal Sciences Group, Wageningen University and Research, Droevendaalsesteeg 1, 6708PB, Wageningen, The Netherlands.
Xuesong LiShanghai Veterinary Research Institute, Chinese Academy of Agriculture Sciences, Office Room D301, Ziyue Road 518, Minhang District, Shanghai, 200241, China.
Qinfang LiuShanghai Veterinary Research Institute, Chinese Academy of Agriculture Sciences, Office Room D301, Ziyue Road 518, Minhang District, Shanghai, 200241, China.
Jianmei YangShanghai Veterinary Research Institute, Chinese Academy of Agriculture Sciences, Office Room D301, Ziyue Road 518, Minhang District, Shanghai, 200241, China.
Qiaoyang TengShanghai Veterinary Research Institute, Chinese Academy of Agriculture Sciences, Office Room D301, Ziyue Road 518, Minhang District, Shanghai, 200241, China.
Zejun LiShanghai Veterinary Research Institute, Chinese Academy of Agriculture Sciences, Office Room D301, Ziyue Road 518, Minhang District, Shanghai, 200241, China. lizejun@shvri.ac.cn.
Nancy BeerensWageningen Bioveterinary Research, Wageningen University and Research, Houtribweg 39, 8221RA, Lelystad, The Netherlands. nancy.beerens@wur.nl.ORCID 0000-0001-6756-4431
Shanghai Veterinary Research Institute · CNWageningen University & Research · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundReassortment between human and avian influenza viruses (AIV) may result in novel viruses with new characteristics that may threaten human health when causing the next flu pandemic. A particular risk may be posed by avian influenza viruses of subtype H9N2 that are currently massively circulating in domestic poultry in Asia and have been shown to infect humans. In this study, we investigate the characteristics and compatibility of a human H1N1 virus with avian H9N2 derived genes.

methodsThe polymerase activity of the viral ribonucleoprotein (RNP) complex as combinations of polymerase-related gene segments derived from different reassortment events was tested in luciferase reporter assays. Reassortant viruses were generated by reverse genetics. Gene segments of the human WSN-H1N1 virus (A/WSN/1933) were replaced by gene segments of the avian A2093-H9N2 virus (A/chicken/Jiangsu/A2093/2011), which were both the Hemagglutinin (HA) and Neuraminidase (NA) gene segments in combination with one of the genes involved in the RNP complex (either PB2, PB1, PA or NP). The growth kinetics and virulence of reassortant viruses were tested on cell lines and mice. The reassortant viruses were then passaged for five generations in MDCK cells and mice lungs. The HA gene of progeny viruses from different passaging paths was analyzed using Next-Generation Sequencing (NGS).

resultsWe discovered that the avian PB1 gene of H9N2 increased the polymerase activity of the RNP complex in backbone of H1N1. Reassortant viruses were able to replicate in MDCK and DF1 cells and mice. Analysis of the NGS data showed a higher substitution rate for the PB1-reassortant virus. In particular, for the PB1-reassortant virus, increased virulence for mice was measured by increased body weight loss after infection in mice.

conclusionsThe higher polymerase activity and increased mutation frequency measured for the PB1-reassortant virus suggests that the avian PB1 gene of H9N2 may drive the evolution and adaptation of reassortant viruses to the human host. This study provides novel insights in the characteristics of viruses that may arise by reassortment of human and avian influenza viruses. Surveillance for infections with H9N2 viruses and the emergence of the reassortant viruses in humans is important for pandemic preparedness.

Indexed as

Influenza A Virus, H1N1 SubtypeInfluenza A Virus, H9N2 SubtypeReassortant VirusesViral ProteinsAnimalsChickensHumansInfluenza, HumanInfluenza in BirdsMiceMutation Rateinfluenza virus polymerase basic protein 1Viral ProteinsAvian influenzaH9N2Human influenzaMutation rateNGSReassortment

Identifiers

PMID35078489
PMCPMC8788113
OpenAlexW4220706497

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.