Evidence map›Paper›PMID 35076848›Full record

ArticleMolecular biology reports2022

Association of PD-1 and PDL-1 gene polymorphisms with colorectal cancer risk and prognosis.

Mehtap Cevik, Esat Namal, Ulkuhan Iner-Koksal, Nur Dinc-Sener, Atila Karaalp, Cavlan Ciftci, Belgin Susleyici

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In one paragraph

Article in Molecular biology reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Mehtap CevikDepartment of Molecular Biology, Marmara University Faculty of Arts and Science, Istanbul, Turkey.
Esat NamalDepartment of Medical Oncology, Demiroglu Bilim University Faculty of Medicine, Istanbul, Turkey.
Ulkuhan Iner-KoksalIstanbul Bagcilar Training and Research Hospital, Istanbul, Turkey.
Nur Dinc-SenerDepartment of Medical Oncology, Demiroglu Bilim University Faculty of Medicine, Istanbul, Turkey.
Atila KaraalpDepartment of Medical Pharmacology, Marmara University School of Medicine, Istanbul, Turkey.
Cavlan CiftciDepartment of Cardiology, Demiroglu Bilim University Faculty of Medicine, Istanbul, Turkey.
Belgin SusleyiciDepartment of Molecular Biology, Marmara University Faculty of Arts and Science, Istanbul, Turkey. belginsusleyici@gmail.com.ORCID http://orcid.org/0000-0001-5790-4674
Istanbul Bilim University · TRMarmara University · TRBağcılar Eğitim ve Araştırma Hastanesi · TR

Funding

marmara üniversitesi FEN-C-DRP-110718-0407
6 · The paper itself

Abstract

backgroundProgrammed Cell Death-1 (PD-1) together with Programmed Death Ligand 1 (PDL-1) have crucial roles in anti-tumor immune response, cancer susceptibility and prognosis. Since PD-1 and PDL-1 have been considered as important genetic risk factors in cancer development and their functions can be affected by polymorphic sites, we investigated the effects of PD-1 rs2227981, rs2227982, rs36084323 and PDL-1 rs2282055, rs822336 gene polymorphisms on colorectal cancer (CRC) risk and prognosis in Turkish subjects. METHODS AND

resultsOur study group consisted of 5-FU or Capacitabine prescribed CRC diagnosed patients and healthy controls. Genotype analyses of PD1 and PDL-1 polymorphisms were performed with Agena MassARRAY platform. rs36084323 CT genotype frequency was found to be higher in controls compared to cases (p < 0.001). rs36084323 CT genotype was highly associated with reduced CRC risk compared to CC genotype (OR 0.068, 95% CI 0.022-0.211, p < 0.001). In adjusted analysis, rs2282055 GG genotype was found to be associated with reduced CRC risk (OR 0.271, 95% CI 0.078-0.940, p = 0.040). rs2282055 TT genotype was found to be related to longer progression-free (Bonferroni corrected Log rank p = 0.013) and overall survival (Bonferroni corrected Log rank p = 0.009) to that of GG genotypes. Patients with rs822336 GC+CC genotypes showed longer overall survival times compared to GG (Log rank p = 0.044).

conclusionsAccording to our results, PD-1 rs822336 G > C polymorphism might be useful in predicting CRC prognosis. PDL-1 rs2282055 T > G polymorphism might be useful in predicting both CRC risk and prognosis. Further studies should be conducted in larger and different populations to clear the roles of PD-1 and PDL-1 polymorphisms in CRC risk and prognosis.

Indexed as

Colorectal NeoplasmsB7-H1 AntigenCase-Control StudiesGenetic Predisposition to DiseaseGenotypeHumansPolymorphism, Single NucleotideProgrammed Cell Death 1 ReceptorB7-H1 AntigenCD274 protein, humanPDCD1 protein, humanProgrammed Cell Death 1 ReceptorColorectal cancerImmune check pointPD-1PDL-1rs2282055rs36084323rs822336

Identifiers

PMID35076848
OpenAlexW4207084327

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.