Evidence map›Paper›PMID 35076390›Full record

ArticleeLife2022

Protein visualization and manipulation in

Jun Xu, Ah-Ram Kim, Ross W Cheloha, Fabian A Fischer, Joshua Shing Shun Li, Yuan Feng, Emily Stoneburner, Richard Binari, Stephanie E Mohr, Jonathan Zirin and 2 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
4.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 57 citations in OpenAlex.

  1. Article
  2. Article
  3. Phage display-mediated immuno-PCR to detect low-abundance secreted proteins inProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. Article
  5. Article
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  7. WormTagDB: A Systematic Survey of Endogenously Tagged Proteins inbioRxiv : the preprint server for biology · 2025
    Article
  8. Article
  9. Article
  10. FETCH enables fluorescent labeling of membrane proteins in vivo with spatiotemporal control inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. microPublication biology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Jun Xu *Department of Genetics, Harvard Medical School, Boston, United States.ORCID 0000-0002-7963-0253
Ah-Ram Kim *Department of Genetics, Harvard Medical School, Boston, United States.ORCID 0000-0001-9597-6759
Ross W ChelohaBoston Children's Hospital and Harvard Medical School, Boston, United States.
Fabian A FischerBoston Children's Hospital and Harvard Medical School, Boston, United States.
Joshua Shing Shun LiDepartment of Genetics, Harvard Medical School, Boston, United States.
Yuan FengDepartment of Genetics, Harvard Medical School, Boston, United States.
Emily StoneburnerDepartment of Genetics, Harvard Medical School, Boston, United States.
Richard BinariDepartment of Genetics, Harvard Medical School, Boston, United States.
Stephanie E MohrDepartment of Genetics, Harvard Medical School, Boston, United States.ORCID 0000-0001-9639-7708
Jonathan ZirinDepartment of Genetics, Harvard Medical School, Boston, United States.
Hidde L PloeghBoston Children's Hospital and Harvard Medical School, Boston, United States.
Norbert PerrimonDepartment of Genetics, Harvard Medical School, Boston, United States.ORCID 0000-0001-7542-472X
Harvard University · USBoston Children's Hospital · USHoward Hughes Medical Institute · US

Funding

Characterization of the Insulin to Autophagy Pathway in MusclesR01AR057352 · NIAMS · HARVARD MEDICAL SCHOOL · PI NORBERT PERRIMON · 2010 to 2026
$8.2M
Functional genomics resources for the Drosophila - TR&D3P41GM132087 · NIGMS · HARVARD MEDICAL SCHOOL · PI PERRIMON, NORBERT · 2019 to 2023
$6.8M
New tools from chemistry and antibodies to address receptor functionZIADK075157 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI CHELOHA, ROSS · 2021 to 2025
$6.6M
Howard Hughes Medical InstituteNIAMS NIH HHS R01 AR057352NIGMS NIH HHS P41 GM132087
6 · The paper itself

Abstract

Expansion of the available repertoire of reagents for visualization and manipulation of proteins will help understand their function. Short epitope tags linked to proteins of interest and recognized by existing binders such as nanobodies facilitate protein studies by obviating the need to isolate new antibodies directed against them. Nanobodies have several advantages over conventional antibodies, as they can be expressed and used as tools for visualization and manipulation of proteins in vivo. Here, we characterize two short (<15aa) NanoTag epitopes, 127D01 and VHH05, and their corresponding high-affinity nanobodies. We demonstrate their use in

Indexed as

AnimalsDrosophila melanogasterDrosophila ProteinsEpitopesSingle-Domain AntibodiesDrosophila ProteinsEpitopesSingle-Domain Antibodiesbiochemistrychemical biologyD. melanogasterDrosophilageneticsgenomicsnanobodyprotein labelingprotein manipulationshort epitope tag

Identifiers

PMID35076390
PMCPMC8853664
OpenAlexW4220669594

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.