Evidence map›Paper›PMID 35075108›Full record

ArticleNature communications2022

Histone demethylase Lsd1 is required for the differentiation of neural cells in Nematostella vectensis.

James M Gahan, Ian U Kouzel, Kamilla Ormevik Jansen, Pawel Burkhardt, Fabian Rentzsch

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Endogenous tagging of multiple cellular components in the sea anemoneProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  8. Article
  9. Epigenetic Regulation inFrontiers in cell and developmental biology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

James M GahanSars International Centre for Marine Molecular Biology, University of Bergen, Thormøhlensgt 55, 5006, Bergen, Norway. james.gahan@uib.no.ORCID http://orcid.org/0000-0001-7043-4873
Ian U KouzelSars International Centre for Marine Molecular Biology, University of Bergen, Thormøhlensgt 55, 5006, Bergen, Norway.
Kamilla Ormevik JansenSars International Centre for Marine Molecular Biology, University of Bergen, Thormøhlensgt 55, 5006, Bergen, Norway.
Pawel BurkhardtSars International Centre for Marine Molecular Biology, University of Bergen, Thormøhlensgt 55, 5006, Bergen, Norway.ORCID http://orcid.org/0000-0001-9826-057X
Fabian RentzschSars International Centre for Marine Molecular Biology, University of Bergen, Thormøhlensgt 55, 5006, Bergen, Norway. fabian.rentzsch@uib.no.ORCID http://orcid.org/0000-0003-0874-7558
University of Bergen · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chromatin regulation is a key process in development but its contribution to the evolution of animals is largely unexplored. Chromatin is regulated by a diverse set of proteins, which themselves are tightly regulated in a cell/tissue-specific manner. Using the cnidarian Nematostella vectensis as a basal metazoan model, we explore the function of one such chromatin regulator, Lysine specific demethylase 1 (Lsd1). We generated an endogenously tagged allele and show that NvLsd1 expression is developmentally regulated and higher in differentiated neural cells than their progenitors. We further show, using a CRISPR/Cas9 generated mutant that loss of NvLsd1 leads to developmental abnormalities. This includes the almost complete loss of differentiated cnidocytes, cnidarian-specific neural cells, as a result of a cell-autonomous requirement for NvLsd1. Together this suggests that the integration of chromatin modifying proteins into developmental regulation predates the split of the cnidarian and bilaterian lineages and constitutes an ancient feature of animal development.

Indexed as

Cell DifferentiationAnimalsChromatinGene Expression Regulation, DevelopmentalHistone DemethylasesNeuronsSea AnemonesChromatinHistone Demethylases

Identifiers

PMID35075108
PMCPMC8786827
OpenAlexW4206940745

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.