Evidence map›Paper›PMID 35074757›Full record

ArticleCancer research2022

In Vivo Modeling of Patient Genetic Heterogeneity Identifies New Ways to Target Cholangiocarcinoma.

Nicholas T Younger, Mollie L Wilson, Anabel Martinez Lyons, Edward J Jarman, Alison M Meynert, Graeme R Grimes, Konstantinos Gournopanos, Scott H Waddell, Peter A Tennant, David H Wilson and 8 more

Open access · hybridAbstract read
In one paragraph

Article in Cancer research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 17 citations in OpenAlex.

  1. Guideline
  2. Review
  3. Cholangiocarcinoma 2026: status quo, unmet needs and priorities.Nature reviews. Gastroenterology & hepatology · 2026
    Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. DKK1 drives immune suppressive phenotypes in intrahepatic cholangiocarcinoma and can be targeted with anti-DKK1 therapeutic DKN-01.Liver international : official journal of the International Association for the Study of the Liver · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 4 institutions in 1 country.

Nicholas T Younger *MRC Human Genetics Unit, Institute of Genetics and Cancer, University of Edinburgh, United Kingdom.ORCID 0000-0001-7601-9283
Mollie L Wilson *MRC Human Genetics Unit, Institute of Genetics and Cancer, University of Edinburgh, United Kingdom.ORCID 0000-0001-8164-7065
Anabel Martinez LyonsMRC Human Genetics Unit, Institute of Genetics and Cancer, University of Edinburgh, United Kingdom.ORCID 0000-0001-6455-7172
Edward J JarmanMRC Human Genetics Unit, Institute of Genetics and Cancer, University of Edinburgh, United Kingdom.
Alison M MeynertMRC Human Genetics Unit, Institute of Genetics and Cancer, University of Edinburgh, United Kingdom.ORCID 0000-0001-5839-1751
Graeme R GrimesMRC Human Genetics Unit, Institute of Genetics and Cancer, University of Edinburgh, United Kingdom.
Konstantinos GournopanosMRC Human Genetics Unit, Institute of Genetics and Cancer, University of Edinburgh, United Kingdom.
Scott H WaddellMRC Human Genetics Unit, Institute of Genetics and Cancer, University of Edinburgh, United Kingdom.
Peter A TennantMRC Human Genetics Unit, Institute of Genetics and Cancer, University of Edinburgh, United Kingdom.ORCID 0000-0002-1233-8602
David H WilsonMRC Human Genetics Unit, Institute of Genetics and Cancer, University of Edinburgh, United Kingdom.ORCID 0000-0001-8322-0380
Rachel V GuestClinical Surgery, University of Edinburgh, Royal Infirmary of Edinburgh, Edinburgh, United Kingdom.ORCID 0000-0003-3213-7688
Stephen J WigmoreClinical Surgery, University of Edinburgh, Royal Infirmary of Edinburgh, Edinburgh, United Kingdom.
Juan Carlos AcostaCancer Research UK Edinburgh Centre, Institute of Genetics and Cancer, Crewe Road South, Edinburgh, United Kingdom.ORCID 0000-0002-7989-7329
Timothy J KendallCentre for Inflammation Research, University of Edinburgh, Edinburgh, United Kingdom.ORCID 0000-0002-4174-2786
Martin S TaylorMRC Human Genetics Unit, Institute of Genetics and Cancer, University of Edinburgh, United Kingdom.ORCID 0000-0001-7656-330X
Duncan SproulMRC Human Genetics Unit, Institute of Genetics and Cancer, University of Edinburgh, United Kingdom.ORCID 0000-0001-6168-4563
Pleasantine MillMRC Human Genetics Unit, Institute of Genetics and Cancer, University of Edinburgh, United Kingdom.
Luke BoulterMRC Human Genetics Unit, Institute of Genetics and Cancer, University of Edinburgh, United Kingdom.ORCID 0000-0002-7954-6705
Institute of Genetics and Cancer · GBEdinburgh Royal Infirmary · GBCentre for Inflammation Research · GBEdinburgh Cancer Research · GB

Funding

Cancer Research UK 16243Cancer Research UK 20837Cancer Research UK 27948Cancer Research UK A20837Cancer Research UK C52499/A27948Medical Research Council MC_PC_17159Medical Research Council MC_UU_00007/11Medical Research Council MC_UU_00007/14Medical Research Council MC_UU_12018/26Wellcome Trust 207793
6 · The paper itself

Abstract

Intrahepatic cholangiocarcinoma (ICC) is an aggressive malignancy of the bile ducts within the liver characterized by high levels of genetic heterogeneity. In the context of such genetic variability, determining which oncogenic mutations drive ICC growth has been difficult, and developing modes of patient stratification and targeted therapies remains challenging. Here we model the interactions between rare mutations with more common driver genes and combine in silico analysis of patient data with highly multiplexed in vivo CRISPR-spCas9 screens to perform a functional in vivo study into the role genetic heterogeneity plays in driving ICC. Novel tumor suppressors were uncovered, which, when lost, cooperate with the RAS oncoprotein to drive ICC growth. Focusing on a set of driver mutations that interact with KRAS to initiate aggressive, sarcomatoid-type ICC revealed that tumor growth relies on Wnt and PI3K signaling. Pharmacologic coinhibition of Wnt and PI3K in vivo impeded ICC growth regardless of mutational profile. Therefore, Wnt and PI3K activity should be considered as a signature by which patients can be stratified for treatment independent of tumor genotype, and inhibitors of these pathways should be levied to treat ICC. SIGNIFICANCE: This work shows that, despite significant genetic heterogeneity, intrahepatic cholangiocarcinoma relies on a limited number of signaling pathways to grow, suggesting common therapeutic vulnerabilities across patients.

Indexed as

Bile Duct NeoplasmsCholangiocarcinomaBile Ducts, IntrahepaticGenetic HeterogeneityHumansPhosphatidylinositol 3-Kinases

Identifiers

PMID35074757
PMCPMC9359731
OpenAlexW4207061063

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.