Evidence map›Paper›PMID 35074519›Full record

ArticleInternational journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases2022

Reconstruction of the Transmission Chain of COVID-19 Outbreak in Beijing's Xinfadi Market, China.

Tianyi Luo, Jiaojiao Wang, Quanyi Wang, Xiaoli Wang, Pengfei Zhao, Daniel Dajun Zeng, Qingpeng Zhang, Zhidong Cao

Abstract read
In one paragraph

Article in International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Tianyi LuoInstitute of Automation Chinese Academy of Sciences, Beijing, 100190, China; University of Chinese Academy of Sciences, Beijing, 100049, China.
Jiaojiao WangInstitute of Automation Chinese Academy of Sciences, Beijing, 100190, China.
Quanyi WangBeijing Research Center for Preventive Medicine, Beijing Center for Disease Prevention and Control, Beijing, China; Beijing Municipal Key Laboratory of Clinical Epidemiology, Beijing, China.
Xiaoli WangBeijing Research Center for Preventive Medicine, Beijing Center for Disease Prevention and Control, Beijing, China; Beijing Municipal Key Laboratory of Clinical Epidemiology, Beijing, China.
Pengfei ZhaoInstitute of Automation Chinese Academy of Sciences, Beijing, 100190, China.
Daniel Dajun ZengInstitute of Automation Chinese Academy of Sciences, Beijing, 100190, China.
Qingpeng ZhangSchool of Data Science, City University of Hong Kong, Hong Kong SAR, China.
Zhidong CaoInstitute of Automation Chinese Academy of Sciences, Beijing, 100190, China. Electronic address: zhidong.cao@ia.ac.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesThe aim of the study was to reconstruct the complete transmission chain of the COVID-19 outbreak in Beijing's Xinfadi Market using data from epidemiological investigations, which contributes to reflecting transmission dynamics and transmission risk factors.

methodsWe set up a transmission model, and the model parameters are estimated from the survey data via Markov chain Monte Carlo sampling. Bayesian data augmentation approaches are used to account for uncertainty in the source of infection, unobserved onset, and infection dates.

resultsThe rate of transmission of COVID-19 within households is 9.2%. Older people are more susceptible to infection. The accuracy of our reconstructed transmission chain was 67.26%. In the gathering place of this outbreak, the Beef and Mutton Trading Hall of Xinfadi market, most of the transmission occurs within 20 m, only 19.61% of the transmission occurs over a wider area (>20 m), with an overall average transmission distance of 13.00 m. The deepest transmission generation is 9. In this outbreak, there were 2 abnormally high transmission events.

conclusionsThe statistical method of reconstruction of transmission trees from incomplete epidemic data provides a valuable tool to help understand the complex transmission factors and provides a practical guideline for investigating the characteristics of the development of epidemics and the formulation of control measures.

Indexed as

COVID-19EpidemicsAgedAnimalsBayes TheoremBeijingCattleChinaDisease OutbreaksHumansSARS-CoV-2

Identifiers

PMID35074519
PMCPMC8776627

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.