Evidence map›Paper›PMID 35073463›Full record

ArticleClinical and translational medicine2022

Interventional- and amputation-stage muscle proteomes in the chronically threatened ischemic limb.

Terence E Ryan, Kyoungrae Kim, Salvatore T Scali, Scott A Berceli, Trace Thome, Zachary R Salyers, Kerri A O'Malley, Thomas D Green, Reema Karnekar, Kelsey H Fisher-Wellman and 2 more

Open access · goldAbstract read
In one paragraph

Article in Clinical and translational medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Terence E RyanDepartment of Applied Physiology and Kinesiology, University of Florida, Gainesville, Florida, USA.ORCID 0000-0003-0780-029X
Kyoungrae KimDepartment of Applied Physiology and Kinesiology, University of Florida, Gainesville, Florida, USA.
Salvatore T ScaliDivision of Vascular Surgery and Endovascular Therapy, University of Florida, Gainesville, Florida, USA.
Scott A BerceliDivision of Vascular Surgery and Endovascular Therapy, University of Florida, Gainesville, Florida, USA.
Trace ThomeDepartment of Applied Physiology and Kinesiology, University of Florida, Gainesville, Florida, USA.
Zachary R SalyersDepartment of Applied Physiology and Kinesiology, University of Florida, Gainesville, Florida, USA.
Kerri A O'MalleyDivision of Vascular Surgery and Endovascular Therapy, University of Florida, Gainesville, Florida, USA.
Thomas D GreenDepartment of Physiology, Brody School of Medicine, East Carolina University, Greenville, North Carolina, USA.
Reema KarnekarDepartment of Physiology, Brody School of Medicine, East Carolina University, Greenville, North Carolina, USA.
Kelsey H Fisher-WellmanDepartment of Physiology, Brody School of Medicine, East Carolina University, Greenville, North Carolina, USA.
Dean J YamaguchiDepartment of Cardiovascular Science, East Carolina University, Greenville, North Carolina, USA.
Joseph M McClungDepartment of Physiology, Brody School of Medicine, East Carolina University, Greenville, North Carolina, USA.
University of Florida · USEast Carolina University · US

Funding

University of Florida Older Americans Independence Center (OAIC)P30AG028740 · NIA · UNIVERSITY OF FLORIDA · PI Stephen D Anton · 2007 to 2026
$22.8M
Molecular mechanisms regulating peripheral arterial disease pathobiology in chronic kidney diseaseR01HL149704 · NHLBI · UNIVERSITY OF FLORIDA · PI Terence E Ryan · 2020 to 2026
$3.6M
Clinical Phenotyping and Disease Specific Sampling to Identify Non-coding RNAs for Human Therapeutics in PADR01HL150003 · NHLBI · AUGUSTA UNIVERSITY · PI ANNEX, BRIAN H, MCCLUNG, JOSEPH MATTHEW · 2020 to 2023
$3.0M
Impaired Mitochondrial Energetics is a Driver of Hemodialysis Access Related Hand DysfunctionR01HL148597 · NHLBI · UNIVERSITY OF FLORIDA · PI SCALI, SALVATORE T. · 2019 to 2023
$2.7M
Variant Determinants of African American Limb Pathology in Peripheral Arterial DiseaseR01HL157659 · NHLBI · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI MCCLUNG, JOSEPH MATTHEW · 2021 to 2024
$2.6M
Translational and Computational Analysis of Dialysis Fistula Maturation Failure-2R01DK119274 · NIDDK · UNIVERSITY OF FLORIDA · PI BERCELI, SCOTT A · 2019 to 2022
$2.2M
American Heart Association 18CDA34110044NHLBI NIH HHS R01 HL148597NHLBI NIH HHS R01 HL149704NHLBI NIH HHS R01 HL150003NHLBI NIH HHS R01 HL157659NIA NIH HHS P30 AG028740NIDDK NIH HHS R01 DK119274U.S. Department of Defense W81XWH-19-1-0213
6 · The paper itself

Abstract

backgroundDespite improved surgical approaches for chronic limb-threatening ischemia (CLTI), amputation rates remain high and contributing tissue-level factors remain unknown. The purpose of this study was twofold: (1) to identify differences between the healthy adult and CLTI limb muscle proteome, and (2) to identify differences in the limb muscle proteome of CLTI patients prior to surgical intervention or at the time of amputation. METHODS AND

resultsGastrocnemius muscle was collected from non-ischemic controls (n = 19) and either pre-interventional surgery (n = 10) or at amputation outcome (n = 29) CLTI patients. All samples were subjected to isobaric tandem-mass-tag-assisted proteomics. The mitochondrion was the primary classification of downregulated proteins (> 70%) in CLTI limb muscles and paralleled robust functional mitochondrial impairment. Upregulated proteins (> 38%) were largely from the extracellular matrix. Across the two independent sites, 39 proteins were downregulated and 12 upregulated uniformly. Pre-interventional CLTI muscles revealed a robust upregulation of mitochondrial proteins but modest functional impairments in fatty acid oxidation as compared with controls. Comparison of pre-intervention and amputation CLTI limb muscles revealed mitochondrial proteome and functional deficits similar to that between amputation and non-ischemic controls. Interestingly, these observed changes occurred despite 62% of the amputation CLTI patients having undergone a prior surgical intervention.

conclusionsThe CLTI proteome supports failing mitochondria as a phenotype that is unique to amputation outcomes. The signature of pre-intervention CLTI muscle reveals stable mitochondrial protein abundance that is insufficient to uniformly prevent functional impairments. Taken together, these findings support the need for future longitudinal investigations aimed to determine whether mitochondrial failure is causally involved in amputation outcomes from CLTI.

Indexed as

AgedAged, 80 and overChronic Limb-Threatening IschemiaCross-Sectional StudiesExtremitiesFemaleFloridaHumansMaleMuscle, SkeletalNorth CarolinaProteomeRisk FactorsProteomemetabolismperipheral artery diseasesurgeryvascular disease

Identifiers

PMID35073463
PMCPMC8785983
OpenAlexW4206967106

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.