Evidence map›Paper›PMID 35071460›Full record

ArticleAnnals of translational medicine2021

Identification of a novel pyroptosis-related gene signature correlated with the prognosis of diffuse glioma patients.

Yize Zhang, Feiyang Xi, Qing Yu, Weiming Lou, Ziqiang Zeng, Ning Su, Jianying Gao, Sainan Duan, Ying Deng, Sixuan Guo and 3 more

Abstract read
In one paragraph

Article in Annals of translational medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Construction of prediction model for prognosis of uterine corpus endometrial carcinoma based on pyroptosis gene.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2023
    Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Yize Zhang *The Second Affiliated Hospital of Nanchang University, Nanchang, China.
Feiyang Xi *Queen Mary School of Nanchang University, Nanchang, China.
Qing YuDepartment of Stomatology, The Second Affiliated Hospital of Nanchang University, Nanchang, China.
Weiming LouThe Institute of Translational Medicine, Nanchang University, Nanchang, China.
Ziqiang ZengThe School of Public Health, Nanchang University, Nanchang, China.
Ning SuThe School of Public Health, Nanchang University, Nanchang, China.
Jianying GaoThe First Affiliated Hospital of Nanchang University, Nanchang University, Nanchang, China.
Sainan DuanThe First Affiliated Hospital of Nanchang University, Nanchang University, Nanchang, China.
Ying DengThe Second Affiliated Hospital of Nanchang University, Nanchang, China.
Sixuan GuoThe Second Affiliated Hospital of Nanchang University, Nanchang, China.
Shuhui LaiThe First Affiliated Hospital of Nanchang University, Nanchang University, Nanchang, China.
Xiaoli Tang *College of Basic Medical Science, Nanchang University, Nanchang, China.
Jicai Zhang *Department of Neurosurgery, The Second Affiliated Hospital of Nanchang University, Nanchang, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDiffuse glioma is the most common primary tumor of the central nervous system and has a poor prognosis. Recently, a new type of programmed cell death (PCD), pyroptosis, has been found to be widely involved in the process of tumor diseases. However, the expression of pyroptosis-related genes (PRGs) in diffuse gliomas and their relationship with prognosis have rarely been evaluated.

methodsIn this study, we obtained RNA sequencing and clinical data from the Cancer Genome Atlas (TCGA) database and the Chinese Glioma Genome Atlas (CGGA) of diffuse glioma patients. Simultaneously, differentially expressed PRGs between TCGA-Glioma tumor samples and the normal brain samples from the Genome Tissue Expression (GTEx) were investigated. Besides, univariate and multivariate Cox regression analysis were performed to identify and construct the prognostic gene signature. Time-dependent receiver operating characteristic (ROC), Kaplan-Meier curve and principal component analysis (PCA) was undertaken to assess the prognostic capacity of the signature. Gene set enrichment analyses (GSEA) and single sample GSEA (ssGSEA) were used to further understand the molecular mechanisms and the difference of immune microenvironment. External validation of two separate cohorts from the CGGA database was then performed.

resultsCaspase 3 (

conclusionsA novel two-PRGs prognostic signature based on gene expression was identified, which could predict diffuse glioma patients' OS time. Pyroptosis may be involved in the establishment of immune microenvironment in diffuse glioma.

Indexed as

Caspase 3 (CASP3)Diffuse gliomainterleukin-18 (IL18)pyroptosisrisk signature

Identifiers

PMID35071460
PMCPMC8756210

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