Evidence map›Paper›PMID 35069165›Full record

ArticleFrontiers in neuroinformatics2021

Young and Aged Neuronal Tissue Dynamics With a Simplified Neuronal Patch Cellular Automata Model.

Reinier Xander A Ramos, Jacqueline C Dominguez, Johnrob Y Bantang

Abstract read
In one paragraph

Article in Frontiers in neuroinformatics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

3 authors.

Reinier Xander A RamosInstrumentation Physics Laboratory, National Institute of Physics, College of Science, University of the Philippines, Quezon City, Philippines.
Jacqueline C DominguezInstitute for Neurosciences, St Luke's Medical Center, Quezon City, Philippines.
Johnrob Y BantangInstrumentation Physics Laboratory, National Institute of Physics, College of Science, University of the Philippines, Quezon City, Philippines.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Realistic single-cell neuronal dynamics are typically obtained by solving models that involve solving a set of differential equations similar to the Hodgkin-Huxley (HH) system. However, realistic simulations of neuronal tissue dynamics -especially at the organ level, the brain- can become intractable due to an explosion in the number of equations to be solved simultaneously. Consequently, such efforts of modeling tissue- or organ-level systems require a lot of computational time and the need for large computational resources. Here, we propose to utilize a cellular automata (CA) model as an efficient way of modeling a large number of neurons reducing both the computational time and memory requirement. First, a first-order approximation of the response function of each HH neuron is obtained and used as the response-curve automaton rule. We then considered a system where an external input is in a few cells. We utilize a Moore neighborhood (both totalistic and outer-totalistic rules) for the CA system used. The resulting steady-state dynamics of a two-dimensional (2D) neuronal patch of size 1, 024 × 1, 024 cells can be classified into three classes: (1) Class 0-inactive, (2) Class 1-spiking, and (3) Class 2-oscillatory. We also present results for different quasi-3D configurations starting from the 2D lattice and show that this classification is robust. The numerical modeling approach can find applications in the analysis of neuronal dynamics in mesoscopic scales in the brain (patch or regional). The method is applied to compare the dynamical properties of the young and aged population of neurons. The resulting dynamics of the aged population shows higher average steady-state activity 〈

Indexed as

activation functionaged neuronsbraincontinuous cellular automataneuronal dynamicsnumerical model

Identifiers

PMID35069165
PMCPMC8777299

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