Evidence map›Paper›PMID 35068051›Full record

ArticleMolecular plant pathology2022

Xanthomonas hortorum - beyond gardens: Current taxonomy, genomics, and virulence repertoires.

Nay C Dia, Lucas Morinière, Bart Cottyn, Eduardo Bernal, Jonathan M Jacobs, Ralf Koebnik, Ebrahim Osdaghi, Neha Potnis, Joël F Pothier

Open access · goldAbstract read
In one paragraph

Article in Molecular plant pathology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
8.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 39 citations in OpenAlex.

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  7. Applied and environmental microbiology · 2022
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  11. Harnessing the genomic diversity ofFrontiers in microbiology · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 8 institutions in 5 countries.

Nay C DiaEnvironmental Genomics and Systems Biology Research Group, Institute for Natural Resource Sciences, Zurich University of Applied Sciences, Wädenswil, Switzerland.ORCID 0000-0003-3881-3237
Lucas MorinièreUniversity of Lyon, Université Claude Bernard Lyon 1, CNRS, INRAE, UMR Ecologie Microbienne, Villeurbanne, France.ORCID 0000-0003-1703-8825
Bart CottynPlant Sciences Unit, Flanders Research Institute for Agriculture, Fisheries and Food, Merelbeke, Belgium.ORCID 0000-0001-8518-9401
Eduardo BernalDepartment of Plant Pathology, The Ohio State University, Columbus, Ohio, USA.ORCID 0000-0003-0823-7080
Jonathan M JacobsDepartment of Plant Pathology, The Ohio State University, Columbus, Ohio, USA.ORCID 0000-0002-1553-2013
Ralf KoebnikPlant Health Institute of Montpellier, University of Montpellier, CIRAD, INRAe, Institut Agro, IRD, Montpellier, France.ORCID 0000-0002-4419-0542
Ebrahim OsdaghiDepartment of Plant Protection, College of Agriculture, University of Tehran, Karaj, Iran.ORCID 0000-0002-0359-0398
Neha PotnisDepartment of Entomology and Plant Pathology, Auburn University, Alabama, USA.ORCID 0000-0002-5418-5894
Joël F PothierEnvironmental Genomics and Systems Biology Research Group, Institute for Natural Resource Sciences, Zurich University of Applied Sciences, Wädenswil, Switzerland.ORCID 0000-0002-9604-7780
The Ohio State University · USCentre de Coopération Internationale en Recherche Agronomique pour le Développement · FRETH Zurich · CHPlant (United States) · USUniversité Claude Bernard Lyon 1 · FRUniversity of Tehran · IRVlaams Instituut voor Biotechnologie · BEZHAW Zurich University of Applied Sciences · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

taxonomyBacteria; Phylum Proteobacteria; Class Gammaproteobacteria; Order Lysobacterales (earlier synonym of Xanthomonadales); Family Lysobacteraceae (earlier synonym of Xanthomonadaceae); Genus Xanthomonas; Species X. hortorum; Pathovars: pv. carotae, pv. vitians, pv. hederae, pv. pelargonii, pv. taraxaci, pv. cynarae, and pv. gardneri. HOST RANGE: Xanthomonas hortorum affects agricultural crops, and horticultural and wild plants. Tomato, carrot, artichoke, lettuce, pelargonium, ivy, and dandelion were originally described as the main natural hosts of the seven separate pathovars. Artificial inoculation experiments also revealed other hosts. The natural and experimental host ranges are expected to be broader than initially assumed. Additionally, several strains, yet to be assigned to a pathovar within X. hortorum, cause diseases on several other plant species such as peony, sweet wormwood, lavender, and oak-leaf hydrangea. EPIDEMIOLOGY AND CONTROL: X. hortorum pathovars are mainly disseminated by infected seeds (e.g., X. hortorum pvs carotae and vitians) or cuttings (e.g., X. hortorum pv. pelargonii) and can be further dispersed by wind and rain, or mechanically transferred during planting and cultivation. Global trade of plants, seeds, and other propagating material constitutes a major pathway for their introduction and spread into new geographical areas. The propagules of some pathovars (e.g., X. horturum pv. pelargonii) are spread by insect vectors, while those of others can survive in crop residues and soils, and overwinter until the following growing season (e.g., X. hortorum pvs vitians and carotae). Control measures against X. hortorum pathovars are varied and include exclusion strategies (i.e., by using certification programmes and quarantine regulations) to multiple agricultural practices such as the application of phytosanitary products. Copper-based compounds against X. hortorum are used, but the emergence of copper-tolerant strains represents a major threat for their effective management. With the current lack of efficient chemical or biological disease management strategies, host resistance appears promising, but is not without challenges. The intrastrain genetic variability within the same pathovar poses a challenge for breeding cultivars with durable resistance. USEFUL WEBSITES: https://gd.eppo.int/taxon/XANTGA, https://gd.eppo.int/taxon/XANTCR, https://gd.eppo.int/taxon/XANTPE, https://www.euroxanth.eu, http://www.xanthomonas.org, http://www.xanthomonas.org/dokuwiki.

Indexed as

GardensXanthomonasCopperGenomicsPlant BreedingPlant DiseasesVirulenceCopperbacterial blightcarrotdandelionleaf spotslettucepelargoniumtomatoXanthomonas hortorum

Identifiers

PMID35068051
PMCPMC8995068
OpenAlexW4206903080

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.