Evidence map›Paper›PMID 35065905›Full record

ArticleDevelopmental biology2022

Hif1α and Wnt are required for posterior gene expression during Xenopus tropicalis tail regeneration.

Jeet H Patel, Preston A Schattinger, Evan E Takayoshi, Andrea E Wills

Open access · greenAbstract read
In one paragraph

Article in Developmental biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Tissue Rotation of theJournal of developmental biology · 2022
    Article
  10. Injury-induced MAPK activation triggers body axis formation inProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Jeet H PatelDepartment of Biochemistry, University of Washington, Seattle, WA, USA; Program in Molecular and Cellular Biology, University of Washington School of Medicine, Seattle, WA, USA.
Preston A SchattingerDepartment of Biochemistry, University of Washington, Seattle, WA, USA.
Evan E TakayoshiDepartment of Biochemistry, University of Washington, Seattle, WA, USA.
Andrea E WillsDepartment of Biochemistry, University of Washington, Seattle, WA, USA; Program in Molecular and Cellular Biology, University of Washington School of Medicine, Seattle, WA, USA; Institute for Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA, USA. Electronic address: aewills@uw.edu.
University of Washington · US

Funding

TRAINING IN MOLECULAR AND CELLULAR BIOLOGYT32GM007270 · NIGMS · UNIVERSITY OF WASHINGTON · PI RAIBLE, DAVID W · 1985 to 2020
$21.0M
Transcriptional regulatory mechanisms of vertebrate regenerationR01NS099124 · NINDS · UNIVERSITY OF WASHINGTON · PI Andrea Elizabeth Wills · 2017 to 2026
$3.3M
NIGMS NIH HHS T32 GM007270NINDS NIH HHS R01 NS099124
6 · The paper itself

Abstract

Regeneration of complex tissues is initiated by an injury-induced stress response, eventually leading to activation of developmental signaling pathways such as Wnt signaling. How early injury cues are interpreted and coupled to activation of these developmental signals and their targets is not well understood. Here, we show that Hif1α, a stress induced transcription factor, is required for tail regeneration in Xenopus tropicalis. We find that Hif1α is required for regeneration of differentiated axial tissues, including axons and muscle. Using RNA-sequencing, we find that Hif1α and Wnt converge on a broad set of genes required for posterior specification and differentiation, including the posterior hox genes. We further show that Hif1α is required for transcription via a Wnt-responsive element, a function that is conserved in both regeneration and early neural patterning. Our findings indicate that Hif1α has regulatory roles in Wnt target gene expression across multiple tissue contexts.

Indexed as

Gene ExpressionAnimalsAxonsBody PatterningGene Expression Regulation, DevelopmentalGenes, HomeoboxHypoxia-Inducible Factor 1, alpha SubunitLarvaMusclesRegenerationTailWnt ProteinsWnt Signaling PathwayXenopusXenopus ProteinsHIF1A protein, XenopusHypoxia-Inducible Factor 1, alpha SubunitWnt ProteinsXenopus ProteinsAnteroposterior patterningHif1αHox genesRegenerationWnt signalingXenopus

Identifiers

PMID35065905
PMCPMC8881967
OpenAlexW4205563631

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.