Evidence map›Paper›PMID 35065233›Full record

ArticleBioorganic & medicinal chemistry letters2022

Amyloidogenic immunoglobulin light chain kinetic stabilizers comprising a simple urea linker module reveal a novel binding sub-site.

Nicholas L Yan, Reji Nair, Alan Chu, Ian A Wilson, Kristen A Johnson, Gareth J Morgan, Jeffery W Kelly

Open access · greenAbstract read
In one paragraph

Article in Bioorganic & medicinal chemistry letters, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Nicholas L YanDepartment of Chemistry, The Scripps Research Institute, La Jolla, CA 92037, USA.
Reji NairDepartment of Chemistry, The Scripps Research Institute, La Jolla, CA 92037, USA.
Alan ChuCalifornia Institute for Biomedical Research, 11119 North Torrey Pines Road, La Jolla, CA 92037, USA.
Ian A WilsonDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA 92037, USA; The Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, CA 92037, USA.
Kristen A JohnsonCalifornia Institute for Biomedical Research, 11119 North Torrey Pines Road, La Jolla, CA 92037, USA.
Gareth J MorganSection of Hematology and Medical Oncology, Department of Medicine, Boston University School of Medicine, Boston, MA 02118, USA; The Amyloidosis Center, Boston University School of Medicine, Boston, MA 02118, USA.
Jeffery W KellyDepartment of Chemistry, The Scripps Research Institute, La Jolla, CA 92037, USA; The Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, CA 92037, USA. Electronic address: jkelly@scripps.edu.
Scripps Research Institute · USCalifornia Institute for Biomedical Research · USBoston University · US

Funding

User Training & OutreachP30GM138396 · NIGMS · UCHICAGO ARGONNE, LLC · PI ROBERT F. FISCHETTI · 2020 to 2026
$34.3M
Probing the Biochemical Mechanisms of Amyloid DiseaseR01DK046335 · NIDDK · SCRIPPS RESEARCH INSTITUTE, THE · PI KELLY, JEFFERY W · 1998 to 2025
$8.8M
Probing the biochemical mechanism of amyloid diseaseR37DK046335 · NIDDK · SCRIPPS RESEARCH INSTITUTE, THE · PI KELLY, JEFFERY W · 2006 to 2015
$5.9M
Probing the Proteinopathy Component of Light Chain Amyloidosis PharmacologicallyR01HL157566 · NHLBI · SCRIPPS RESEARCH INSTITUTE, THE · PI JEFFERY W KELLY · 2021 to 2026
$3.3M
High-Speed High-Sensitivity Detector for X-ray Micro-Crystallography at GM/CA@APSS10OD012289 · OD · UNIVERSITY OF CHICAGO · PI FISCHETTI, ROBERT F. · 2014 to 2014
$2.0M
Potent and specific small molecule stabilizers of amyloidogenic antibody light chainsF31HL154732 · NHLBI · SCRIPPS RESEARCH INSTITUTE, THE · PI YAN, NICHOLAS · 2020 to 2022
$66k
NHLBI NIH HHS F31 HL154732NHLBI NIH HHS R01 HL157566NIDDK NIH HHS R01 DK046335NIDDK NIH HHS R37 DK046335NIGMS NIH HHS P30 GM138396NIH HHS S10 OD012289
6 · The paper itself

Abstract

In immunoglobulin light chain (LC) amyloidosis, the misfolding, or misfolding and misassembly of LC a protein or fragments thereof resulting from aberrant endoproteolysis, causes organ damage to patients. A small molecule "kinetic stabilizer" drug could slow or stop these processes and improve prognosis. We previously identified coumarin-based kinetic stabilizers of LCs that can be divided into four components, including a "linker module" and "distal substructure". Our prior studies focused on characterizing carbamate, hydantoin, and spirocyclic urea linker modules, which bind in a solvent-exposed site at the V

Indexed as

Binding SitesCoumarinsDose-Response Relationship, DrugHumansImmunoglobulin Light ChainsKineticsMolecular StructureProtein StabilityStructure-Activity RelationshipUreacoumarinCoumarinsImmunoglobulin Light ChainsUreaAmyloidosisCrystal structureImmunoglobulinKinetic stabilizerLight chainProteolysis

Identifiers

PMID35065233
PMCPMC8857066
OpenAlexW4205812302

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.