Evidence map›Paper›PMID 35064205›Full record

ArticleCommunications biology2022

An autonomous TCR signal-sensing switch influences CD4/CD8 lineage choice in mice.

Jayati Basu, Jikun Zha, Emmanuelle Nicolas, Michael Coulton, Philip Czyzewicz, Xiang Hua, Lu Ge, Dietmar J Kappes

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Jayati BasuFox Chase Cancer Center, 333 Cottman Avenue, Philadelphia, PA, 19111, USA.
Jikun ZhaFox Chase Cancer Center, 333 Cottman Avenue, Philadelphia, PA, 19111, USA.
Emmanuelle NicolasFox Chase Cancer Center, 333 Cottman Avenue, Philadelphia, PA, 19111, USA.
Michael CoultonFox Chase Cancer Center, 333 Cottman Avenue, Philadelphia, PA, 19111, USA.
Philip CzyzewiczFox Chase Cancer Center, 333 Cottman Avenue, Philadelphia, PA, 19111, USA.
Xiang HuaFox Chase Cancer Center, 333 Cottman Avenue, Philadelphia, PA, 19111, USA.
Lu GeFox Chase Cancer Center, 333 Cottman Avenue, Philadelphia, PA, 19111, USA.
Dietmar J KappesFox Chase Cancer Center, 333 Cottman Avenue, Philadelphia, PA, 19111, USA. Dietmar.Kappes@fccc.edu.ORCID http://orcid.org/0000-0002-9112-509X
Fox Chase Cancer Center · US

Funding

WORD PROCESSING CENTER--COREP30CA006927 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI Dietmar J Kappes · 1985 to 2026
$138.8M
Transcriptional Control of Th-POK, a Key Regulator of Lineage ControlR01AI068907 · NIAID · RESEARCH INST OF FOX CHASE CAN CTR · PI KAPPES, DIETMAR J · 2008 to 2011
$2.0M
Dissecting the role of ThPOK in thymic development and T cell differentiationR01GM107179 · NIGMS · RESEARCH INST OF FOX CHASE CAN CTR · PI KAPPES, DIETMAR J · 2014 to 2017
$1.4M
NCI NIH HHS P30 CA006927NIAID NIH HHS R01 AI068907NIGMS NIH HHS R01 GM107179
6 · The paper itself

Abstract

How multipotential cells initiate distinct gene expression programs in response to external cues to instruct cell fate choice remains a fundamental question in biology. Establishment of CD4 and CD8 T cell fates during thymocyte development is critically regulated by T cell receptor (TCR) signals, which in turn control expression of the CD4-determining transcription factor ThPOK. However, the mechanism whereby differential TCR signals are molecularly interpreted to promote or antagonize ThPOK expression, and thereby CD4 versus CD8 lineage fates remains unknown. Here we show, using reverse genetic and molecular approaches that an autonomous, position-independent TCR-sensing switch is embedded within the ThPOK locus. Further, using an in vivo mutagenesis approach, we demonstrate that differential TCR signals are interpreted during lineage commitment by relative binding of EGR, NFAT and Ebox factors to this bistable switch. Collectively our study reveals the central molecular mechanism whereby TCR signaling influences differential lineage choice. Ultimately, these findings may provide an important new tool for skewing T cell fate to treat cancer and autoimmune diseases.

Indexed as

AnimalsAntibodies, MonoclonalBiosensing TechniquesCD4-Positive T-LymphocytesCD8-Positive T-LymphocytesGene Expression RegulationGene SilencingHomeodomain ProteinsMiceMice, TransgenicReceptors, Antigen, T-Cell, alpha-betaAntibodies, MonoclonalHomeodomain ProteinsRAG-1 proteinReceptors, Antigen, T-Cell, alpha-beta

Identifiers

PMID35064205
PMCPMC8783009
OpenAlexW4206247288

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.