Evidence map›Paper›PMID 35064165›Full record

Observational studyScientific reports2022

A large dataset of white blood cells containing cell locations and types, along with segmented nuclei and cytoplasm.

Zahra Mousavi Kouzehkanan, Sepehr Saghari, Sajad Tavakoli, Peyman Rostami, Mohammadjavad Abaszadeh, Farzaneh Mirzadeh, Esmaeil Shahabi Satlsar, Maryam Gheidishahran, Fatemeh Gorgi, Saeed Mohammadi and 1 more

Open access · goldAbstract readObservational Study
In one paragraph

Observational study in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed, 1 pooled it
11.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 1 synthesis or guideline pooled it, 123 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 2 countries.

Zahra Mousavi Kouzehkanan *School of ECE, College of Engineering, University of Tehran, Tehran, Iran.
Sepehr Saghari *Nimaad Health Equipment Development Company, Tehran, Iran.
Sajad TavakoliNimaad Health Equipment Development Company, Tehran, Iran.
Peyman RostamiNimaad Health Equipment Development Company, Tehran, Iran.
Mohammadjavad AbaszadehSchool of ECE, College of Engineering, University of Tehran, Tehran, Iran.
Farzaneh MirzadehNimaad Health Equipment Development Company, Tehran, Iran.
Esmaeil Shahabi SatlsarNimaad Health Equipment Development Company, Tehran, Iran.
Maryam GheidishahranDepartment of Hematology and Blood Transfusion, School of Allied Medical Sciences, Iran University of Medical Sciences, Tehran, Iran.
Fatemeh GorgiBachelor of Laboratory of Sciences, Faculty of Paramedical, Mashhad University of Medical Sciences, Mashhad, Iran.
Saeed MohammadiHematology-Oncology and Stem Cell Transplantation Research Center, Tehran University of Medical Sciences, Tehran, Iran.
Reshad HosseiniSchool of ECE, College of Engineering, University of Tehran, Tehran, Iran. reshad.hosseini@ut.ac.ir.
National Iranian Oil Company (Iran) · IRUniversity of Tehran · IRFlometrics (United States) · USIran University of Medical Sciences · IRMashhad University of Medical Sciences · IRTehran University of Medical Sciences · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Accurate and early detection of anomalies in peripheral white blood cells plays a crucial role in the evaluation of well-being in individuals and the diagnosis and prognosis of hematologic diseases. For example, some blood disorders and immune system-related diseases are diagnosed by the differential count of white blood cells, which is one of the common laboratory tests. Data is one of the most important ingredients in the development and testing of many commercial and successful automatic or semi-automatic systems. To this end, this study introduces a free access dataset of normal peripheral white blood cells called Raabin-WBC containing about 40,000 images of white blood cells and color spots. For ensuring the validity of the data, a significant number of cells were labeled by two experts. Also, the ground truths of the nuclei and cytoplasm are extracted for 1145 selected cells. To provide the necessary diversity, various smears have been imaged, and two different cameras and two different microscopes were used. We did some preliminary deep learning experiments on Raabin-WBC to demonstrate how the generalization power of machine learning methods, especially deep neural networks, can be affected by the mentioned diversity. Raabin-WBC as a public data in the field of health can be used for the model development and testing in different machine learning tasks including classification, detection, segmentation, and localization.

Indexed as

Deep LearningAdolescentAdultAgedCell NucleusChildCytoplasmDatasets as TopicElementary ParticlesFemaleHematologic DiseasesHumansImage Processing, Computer-AssistedLeukocytesMaleMiddle Aged

Identifiers

PMID35064165
PMCPMC8782871
OpenAlexW4207016125

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.