Evidence map›Paper›PMID 35063098›Full record

ReviewMolecular cell2022

Next generation single-molecule techniques: Imaging, labeling, and manipulation in vitro and in cellulo.

Taekjip Ha, Christian Kaiser, Sua Myong, Bin Wu, Jie Xiao

Abstract readReview
In one paragraph

Review in Molecular cell, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. The Fantastic Single-Molecule Techniques.Chemical & biomedical imaging · 2026
    Review
  5. Article
  6. Kinetic control of mammalian transcription elongation.Nature structural & molecular biology · 2026
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Positron emission tomography probes for stem cell monitoring: a review.American journal of translational research · 2024
    Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Taekjip HaDepartment of Biophysics and Biophysical Chemistry, Johns Hopkins School of Medicine, Baltimore, MD 21205, USA; Department of Biophysics, Johns Hopkins University, Baltimore, MD 21218, USA; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD 21218, USA; Howard Hughes Medical Institute, Baltimore, MD 21205, USA. Electronic address: tjha@jhu.edu.
Christian KaiserDepartment of Biology, Johns Hopkins University, Baltimore, MD 21218, USA.
Sua MyongDepartment of Biophysics, Johns Hopkins University, Baltimore, MD 21218, USA.
Bin WuDepartment of Biophysics and Biophysical Chemistry, Johns Hopkins School of Medicine, Baltimore, MD 21205, USA.
Jie XiaoDepartment of Biophysics and Biophysical Chemistry, Johns Hopkins School of Medicine, Baltimore, MD 21205, USA.

Funding

PROGRAM IN MOLECULAR BIOPHYSICST32GM008403 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI BARRICK, DOUGLAS E. · 1990 to 2019
$13.5M
Spatial Organization and Regulation of Bacterial Cellular ProcessesR35GM136436 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI Jie Xiao · 2020 to 2026
$4.8M
Probing the structure, dynamics and function of the E. coli divisomeR01GM086447 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI XIAO, JIE · 2011 to 2019
$3.8M
Folding and Chaperone Interactions of Multi-domain ProteinsR01GM121567 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI HILSER, VINCENT J. · 2017 to 2025
$3.2M
NIGMS NIH HHS R01 GM086447NIGMS NIH HHS R35 GM136436NIGMS NIH HHS T32 GM008403
6 · The paper itself

Abstract

Owing to their unique abilities to manipulate, label, and image individual molecules in vitro and in cellulo, single-molecule techniques provide previously unattainable access to elementary biological processes. In imaging, single-molecule fluorescence resonance energy transfer (smFRET) and protein-induced fluorescence enhancement in vitro can report on conformational changes and molecular interactions, single-molecule pull-down (SiMPull) can capture and analyze the composition and function of native protein complexes, and single-molecule tracking (SMT) in live cells reveals cellular structures and dynamics. In labeling, the abilities to specifically label genomic loci, mRNA, and nascent polypeptides in cells have uncovered chromosome organization and dynamics, transcription and translation dynamics, and gene expression regulation. In manipulation, optical tweezers, integration of single-molecule fluorescence with force measurements, and single-molecule force probes in live cells have transformed our mechanistic understanding of diverse biological processes, ranging from protein folding, nucleic acids-protein interactions to cell surface receptor function.

Indexed as

AnimalsDiffusion of InnovationFluorescence Resonance Energy TransferGenomicsHumansMicroscopy, FluorescenceMolecular ImagingOptical ImagingProteomicsSingle Molecule Imaginggenome imaginglive-cell imagingsingle-molecule fluorescence resonance energy transfersingle-molecule imagingsingle-molecule protein-induced fluorescence enhancementsingle-molecule pull-downsingle-molecule trackingtranstranscription dynamics

Identifiers

PMID35063098
PMCPMC12104962

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.