Evidence map›Paper›PMID 35062305›Full record

ArticleViruses2022

Dating the Origin and Estimating the Transmission Rates of the Major HIV-1 Clusters in Greece: Evidence about the Earliest Subtype A1 Epidemic in Europe.

Stefanos Limnaios, Evangelia Georgia Kostaki, Georgios Adamis, Myrto Astriti, Maria Chini, Nikos Mangafas, Marios Lazanas, Stavros Patrinos, Simeon Metallidis, Olga Tsachouridou and 28 more

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Article in Viruses, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

38 authors.

Stefanos LimnaiosDepartment of Hygiene, Epidemiology and Medical Statistics, Medical School, National and Kapodistrian University of Athens, 11527 Athens, Greece.ORCID 0000-0002-1435-6740
Evangelia Georgia KostakiDepartment of Hygiene, Epidemiology and Medical Statistics, Medical School, National and Kapodistrian University of Athens, 11527 Athens, Greece.ORCID 0000-0002-3346-0930
Georgios Adamis1st Department of Internal Medicine, G. Gennimatas General Hospital, 11527 Athens, Greece.
Myrto Astriti1st Department of Internal Medicine, G. Gennimatas General Hospital, 11527 Athens, Greece.
Maria Chini3rd Department of Internal Medicine-Infectious Diseases Unit, "Korgialeneio-Benakeio" Red Cross General Hospital, 11526 Athens, Greece.ORCID 0000-0002-4551-3024
Nikos Mangafas3rd Department of Internal Medicine-Infectious Diseases Unit, "Korgialeneio-Benakeio" Red Cross General Hospital, 11526 Athens, Greece.
Marios Lazanas3rd Department of Internal Medicine-Infectious Diseases Unit, "Korgialeneio-Benakeio" Red Cross General Hospital, 11526 Athens, Greece.ORCID 0000-0002-3068-105X
Stavros PatrinosNational Public Health Organization, 15123 Marousi, Greece.
Simeon Metallidis1st Department of Internal Medicine, AHEPA University Hospital, Medical School, Aristotle University of Thessaloniki, 54636 Thessaloniki, Greece.
Olga Tsachouridou1st Department of Internal Medicine, AHEPA University Hospital, Medical School, Aristotle University of Thessaloniki, 54636 Thessaloniki, Greece.
Vasileios Papastamopoulos5th Department of Internal Medicine and Infectious Diseases, Evaggelismos General Hospital, 10676 Athens, Greece.
Eleni Kakalou5th Department of Internal Medicine and Infectious Diseases, Evaggelismos General Hospital, 10676 Athens, Greece.
Dimitrios ChatzidimitriouNational AIDS Reference Centre of Northern Greece, Department of Microbiology, Medical School, Aristotle University of Thessaloniki, 54124 Thessaloniki, Greece.
Anastasia Antoniadou4th Department of Medicine, Attikon University General Hospital, Medical School, National and Kapodistrian University of Athens, 12462 Athens, Greece.ORCID 0000-0003-0991-9198
Antonios Papadopoulos4th Department of Medicine, Attikon University General Hospital, Medical School, National and Kapodistrian University of Athens, 12462 Athens, Greece.
Mina Psichogiou1st Department of Medicine, Laikon General Hospital, Medical School, National and Kapodistrian University of Athens, 11527 Athens, Greece.
Dimitrios Basoulis1st Department of Medicine, Laikon General Hospital, Medical School, National and Kapodistrian University of Athens, 11527 Athens, Greece.ORCID 0000-0002-0686-872X
Maria GovaDepartment of Hygiene, Epidemiology and Medical Statistics, Medical School, National and Kapodistrian University of Athens, 11527 Athens, Greece.
Dimitrios PilalasMedical School, Aristotle University of Thessaloniki, 54124 Thessaloniki, Greece.ORCID 0000-0003-1362-8027
Dimitra ParaskevaDepartment of Internal Medicine, Tzaneio General Hospital, 18536 Piraeus, Greece.
Georgios ChrysosDepartment of Internal Medicine, Tzaneio General Hospital, 18536 Piraeus, Greece.
Vasileios PaparizosHIV/AIDS Unit, A. Syngros Hospital of Dermatology and Venereology, 16121 Athens, Greece.
Sofia KourkountiHIV/AIDS Unit, A. Syngros Hospital of Dermatology and Venereology, 16121 Athens, Greece.
Helen SambatakouHIV Unit, 2nd Department of Internal Medicine, Hippokration General Hospital, Medical School, National and Kapodistrian University of Athens, 11527 Athens, Greece.
Vasileios BolanosHIV Unit, 2nd Department of Internal Medicine, Hippokration General Hospital, Medical School, National and Kapodistrian University of Athens, 11527 Athens, Greece.
Nikolaos V SipsasDepartment of Pathophysiology, Laikon General Hospital, Medical School, National and Kapodistrian University of Athens, 11527 Athens, Greece.ORCID 0000-0001-6955-3453
Malvina Lada2nd Department of Internal Medicine, Sismanogleion General Hospital, 15126 Marousi, Greece.ORCID 0000-0001-9979-1495
Emmanouil BarbounakisDepartment of Internal Medicine, University Hospital of Heraklion "PAGNI", Medical School, University of Crete, 71110 Heraklion, Greece.
Evrikleia KantzilakiDepartment of Internal Medicine, University Hospital of Heraklion "PAGNI", Medical School, University of Crete, 71110 Heraklion, Greece.
Periklis PanagopoulosDepartment of Internal Medicine, University General Hospital, Democritus University of Thrace, 68100 Alexandroupolis, Greece.
Efstratios MaltezosDepartment of Internal Medicine, University General Hospital, Democritus University of Thrace, 68100 Alexandroupolis, Greece.
Stelios DrimisDepartment of Internal Medicine, Tzaneio General Hospital, 18536 Piraeus, Greece.
Vana SypsaDepartment of Hygiene, Epidemiology and Medical Statistics, Medical School, National and Kapodistrian University of Athens, 11527 Athens, Greece.
Pagona LagiouDepartment of Hygiene, Epidemiology and Medical Statistics, Medical School, National and Kapodistrian University of Athens, 11527 Athens, Greece.
Gkikas MagiorkinisDepartment of Hygiene, Epidemiology and Medical Statistics, Medical School, National and Kapodistrian University of Athens, 11527 Athens, Greece.
Angelos HatzakisDepartment of Hygiene, Epidemiology and Medical Statistics, Medical School, National and Kapodistrian University of Athens, 11527 Athens, Greece.
Lemonia SkouraNational AIDS Reference Centre of Northern Greece, Department of Microbiology, Medical School, Aristotle University of Thessaloniki, 54124 Thessaloniki, Greece.
Dimitrios ParaskevisDepartment of Hygiene, Epidemiology and Medical Statistics, Medical School, National and Kapodistrian University of Athens, 11527 Athens, Greece.ORCID 0000-0001-6167-7152

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Our aim was to estimate the date of the origin and the transmission rates of the major local clusters of subtypes A1 and B in Greece. Phylodynamic analyses were conducted in 14 subtype A1 and 31 subtype B clusters. The earliest dates of origin for subtypes A1 and B were in 1982.6 and in 1985.5, respectively. The transmission rate for the subtype A1 clusters ranged between 7.54 and 39.61 infections/100 person years (IQR: 9.39, 15.88), and for subtype B clusters between 4.42 and 36.44 infections/100 person years (IQR: 7.38, 15.04). Statistical analysis revealed that the average difference in the transmission rate between the PWID and the MSM clusters was 6.73 (95% CI: 0.86 to 12.60;

Indexed as

EpidemicsCluster AnalysisEuropeFemaleGreeceHIV-1HIV InfectionsHumansMaleSexual and Gender Minoritiesdate of originGreecehuman immunodeficiency virus (HIV)molecular epidemiologyphylodynamic analysistransmission clusterstransmission rate

Identifiers

PMID35062305
PMCPMC8782043

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