Evidence map›Paper›PMID 35061216›Full record

ArticleNeuroinformatics2022

Is Neuroscience FAIR? A Call for Collaborative Standardisation of Neuroscience Data.

Jean-Baptiste Poline, David N Kennedy, Friedrich T Sommer, Giorgio A Ascoli, David C Van Essen, Adam R Ferguson, Jeffrey S Grethe, Michael J Hawrylycz, Paul M Thompson, Russell A Poldrack and 6 more

Abstract read
In one paragraph

Article in Neuroinformatics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. From lab to life: challenges and perspectives of fNIRS for haemodynamic-based neurofeedback in real-world environments.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Review
  6. Article
  7. Reporting checklists in neuroimaging: promoting transparency, replicability, and reproducibility.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2024
    Review
  8. Review
  9. Article
  10. Automating literature screening and curation with applications to computational neuroscience.Journal of the American Medical Informatics Association : JAMIA · 2024
    Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Jean-Baptiste PolineFaculty of Medicine, Jr. Brain Imaging Center, McGill UniversityMontreal Canada and Henry H. WheelerHelen Wills Neuroscience Institute, University of California Berkeley, Berkeley, CA, USA. jean-baptiste.poline@mcgill.ca.ORCID http://orcid.org/0000-0002-9794-749X
David N KennedyDepartment of Psychiatry, University of Massachusetts Chan Medical School, Worcester, MA, USA.
Friedrich T SommerRedwood Center for Theoretical Neuroscience, University of California, Berkeley, CA, USA.
Giorgio A AscoliBioengineering Department, Neuroscience Program, and Center for Neural Informatics, Structures, and Plasticity; Volgenau School of Engineering and Krasnow Institute for Advanced Study, George Mason University, Fairfax, VA, USA.
David C Van EssenAnatomy & Neurobiology Department, Washington University in St. Louis, St. Louis, MO, USA.
Adam R FergusonBrain and Spinal Injury Center, UCSF, University of California San Francisco School of Medicine, San Francisco, CA, USA.
Jeffrey S GretheCenter for Research in Biological Systems, University of California, San Diego, CA, USA.
Michael J HawrylyczAllen Institute for Brain Science, Seattle, WA, USA.
Paul M ThompsonImaging Genetics Center, Stevens Institute for Neuroimaging & Informatics, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.
Russell A PoldrackDepartment of Psychology and Stanford Center for Reproducible Neuroscience, Stanford University, Stanford, CA, 94305, USA.
Satrajit S GhoshMassachusetts Institute of Technology, Boston, MA, USA.
David B KeatorUniversity of California Irvine, Irvine, CA, USA.
Thomas L AtheyCenter for Imaging Science, Department of Biomedical Engineering, Johns Hopkins University, Maryland, Baltimore, USA.
Joshua T VogelsteinInstitute for Computational Medicine, Center for Imaging Science, Department of Biomedical Engineering, Johns Hopkins University, Baltimore, Maryland, USA.
Helen S MaybergDepartments of Neurology and Neurosurgery, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Maryann E MartoneDepartment of Neurosciences, University of California, San Diego, La Jolla, CA, 92093-0662, USA.

Funding

Resource DiscoveryP41EB019936 · NIBIB · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI David Nelson Kennedy · 2016 to 2026
$15.2M
Anatomical characterization of neuronal cell types of the mouse brainU01MH114829 · NIMH · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ASCOLI, GIORGIO A, DONG, HONG-WEI · 2017 to 2021
$13.9M
DANDI: Distributed Archives for Neurophysiology Data IntegrationR24MH117295 · NIMH · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI Satrajit Sujit Ghosh, Yaroslav O Halchenko · 2019 to 2026
$11.6M
Generation and Description of Neuronal Morphology and ConnectivityR01NS039600 · NINDS · GEORGE MASON UNIVERSITY · PI ASCOLI, GIORGIO A · 1999 to 2024
$6.9M
Exposing the Deep Content of the Publication: Knowledge Extraction for Neuroimaging in Child PsychiatryR01MH083320 · NIMH · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI FRAZIER, JEAN A, KENNEDY, DAVID NELSON · 2009 to 2020
$6.3M
Cytoskeletal mechanisms of dendrite arbor shape developmentR01NS086082 · NINDS · GEORGIA STATE UNIVERSITY · PI ASCOLI, GIORGIO A, COX, DANIEL N · 2013 to 2023
$3.1M
Building analysis tools and a theory framework for inferring principles of neural computation from multi-scale organization in brain recordingsR01EB026955 · NIBIB · UNIVERSITY OF CALIFORNIA BERKELEY · PI SOMMER, FRIEDRICH T · 2018 to 2020
$1.1M
NIBIB NIH HHS P41 EB019936NIBIB NIH HHS R01 EB026955NIMH NIH HHS R01 MH083320NIMH NIH HHS R24 MH117295NIMH NIH HHS U01 MH114829NINDS NIH HHS R01 NS039600NINDS NIH HHS R01 NS086082
6 · The paper itself

Abstract

In this perspective article, we consider the critical issue of data and other research object standardisation and, specifically, how international collaboration, and organizations such as the International Neuroinformatics Coordinating Facility (INCF) can encourage that emerging neuroscience data be Findable, Accessible, Interoperable, and Reusable (FAIR). As neuroscientists engaged in the sharing and integration of multi-modal and multiscale data, we see the current insufficiency of standards as a major impediment in the Interoperability and Reusability of research results. We call for increased international collaborative standardisation of neuroscience data to foster integration and efficient reuse of research objects.

Indexed as

Data CollectionNeurosciencesInternational Neuroinformatics Coordinating FacilityInteroperabilityNeuroscienceStandards,

Identifiers

PMID35061216
PMCPMC9300762

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.