Evidence map›Paper›PMID 35059974›Full record

ArticleMolecular biology reports2022

Complete chloroplast genome of Campsis grandiflora (Thunb.) schum and systematic and comparative analysis within the family Bignoniaceae.

Haimei Chen, Zhuoer Chen, Qing Du, Mei Jiang, Bin Wang, Chang Liu

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Article in Molecular biology reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 30% of its field
1 · What the graph read from it

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. The complete chloroplast genome ofMitochondrial DNA. Part B, Resources · 2024
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  4. The complete plastome ofMitochondrial DNA. Part B, Resources · 2023
    Article
  5. Article
  6. Comparative chloroplast genome analyses ofFrontiers in plant science · 2022
    Article
4 · The record

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5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Haimei Chen *Key Laboratory of Bioactive Substances and Resource Utilization of Chinese Herbal Medicine from Ministry of Education, Engineering Research Center of Chinese Medicine Resources from Ministry of Education, Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences, Peking Union Medical College, 100193, Beijing, People's Republic of China.ORCID http://orcid.org/0000-0001-7100-5915
Zhuoer Chen *School of Pharmacy, Xiangnan University, 423000, Chenzhou, Hunan, China.
Qing DuCollege of Pharmacy, Qinghai Minzu University, 810007, Xining, Qinghai, China.ORCID http://orcid.org/0000-0002-0732-3377
Mei JiangKey Laboratory of Bioactive Substances and Resource Utilization of Chinese Herbal Medicine from Ministry of Education, Engineering Research Center of Chinese Medicine Resources from Ministry of Education, Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences, Peking Union Medical College, 100193, Beijing, People's Republic of China.ORCID http://orcid.org/0000-0002-8266-7233
Bin WangSchool of Pharmacy, Xiangnan University, 423000, Chenzhou, Hunan, China.ORCID http://orcid.org/0000-0002-9939-7030
Chang LiuKey Laboratory of Bioactive Substances and Resource Utilization of Chinese Herbal Medicine from Ministry of Education, Engineering Research Center of Chinese Medicine Resources from Ministry of Education, Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences, Peking Union Medical College, 100193, Beijing, People's Republic of China. cliu6688@yahoo.com.ORCID http://orcid.org/0000-0003-3879-7302
Chinese Academy of Medical Sciences & Peking Union Medical College · CNXiangnan University · CNQinghai University · CN

Funding

Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences and Peking Union Medical College 2017-I2M-1-013National Major Science and Technology Projects of China 2018FY100705National Natural Science Foundation of China 81872966QingHai Department of Science and Technology 2020-ZJ-Y20
6 · The paper itself

Abstract

backgroundPlants belonging to the Bignoniaceae family have a wide distribution in the tropics and large populations around the world. However, limited information is available about Bignoniaceae. This study aimed to obtain more research information about Bignoniaceae plants and provide data support for the study of plant plastid genomes. METHODS AND

resultsIn the present study, we focused on the chloroplast genome bio-information of Campsis grandiflora. The chloroplast DNA of C. grandiflora was extracted, sequenced, assembled, and annotated with corresponding software. Results show that the complete chloroplast genome of C. grandiflora is 154,303 bp in length and has a quadripartite structure with large single copy of 85,064 bp and a small single copy of 18,009 bp separated by inverted repeats of 25,615 bp. A total of 110 genes in C. grandiflora comprised 79 protein-coding genes, 27 transfer RNA genes, and 4 ribosomal RNA genes. The distribution of simple sequence repeats and long repeat sequences was determined. We carried out phylogenetic analysis based on homologous amino acid sequence among 45 species derived from Bignoniaceae. Compared with the chloroplast genome of A. thaliana, an inversion was identified in that of C. grandiflora, which result in the incomplete clpP gene.

conclusionsThe chloroplast genomes were used for molecular marker, species identification, and phylogenetic studies. The outcome strongly supported that C. grandiflora and genus Incarvillea formed a cluster within Bignoniaceae. This study identified the unique characteristics of the C. grandiflora cp. genome, thus providing theoretical basis for species identification and biological research.

Indexed as

BignoniaceaeGenome, ChloroplastGenome, PlantMicrosatellite RepeatsPhylogenyBignoniaceaeCampsis grandifloraChloroplast genomeclpP geneGene rearrangement

Identifiers

PMID35059974
OpenAlexW4206298920

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.