Evidence map›Paper›PMID 35059906›Full record

ArticleInternational microbiology : the official journal of the Spanish Society for Microbiology2022

Peroxidase-producing actinobacteria from Algerian environments and insights from the genome sequence of peroxidase-producing Streptomyces sp. S19.

Rima Maibeche, Nawel Boucherba, Kamel Bendjeddou, Alaric Prins, Cilia Bouiche, Samir Hamma, Mohammed Benhoula, Zahra Azzouz, Azzeddine Bettache, Said Benallaoua and 1 more

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Article in International microbiology : the official journal of the Spanish Society for Microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 6 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Rima MaibecheLaboratoire de Microbiologie Appliquée (LMA), Faculté Des Sciences de La Nature Et de La Vie, Université de Bejaia, 06000, Bejaia, Algeria.
Nawel BoucherbaLaboratoire de Microbiologie Appliquée (LMA), Faculté Des Sciences de La Nature Et de La Vie, Université de Bejaia, 06000, Bejaia, Algeria.ORCID http://orcid.org/0000-0002-7273-1019
Kamel BendjeddouLaboratoire de Microbiologie Appliquée (LMA), Faculté Des Sciences de La Nature Et de La Vie, Université de Bejaia, 06000, Bejaia, Algeria.ORCID http://orcid.org/0000-0001-9179-2960
Alaric PrinsApplied Microbial and Health Biotechnology Institute, Cape Peninsula University of Technology, Bellville, South Africa.ORCID http://orcid.org/0000-0002-1797-3648
Cilia BouicheLaboratoire de Microbiologie Appliquée (LMA), Faculté Des Sciences de La Nature Et de La Vie, Université de Bejaia, 06000, Bejaia, Algeria.
Samir HammaLaboratoire de Microbiologie Appliquée (LMA), Faculté Des Sciences de La Nature Et de La Vie, Université de Bejaia, 06000, Bejaia, Algeria.
Mohammed BenhoulaLaboratoire de Microbiologie Appliquée (LMA), Faculté Des Sciences de La Nature Et de La Vie, Université de Bejaia, 06000, Bejaia, Algeria.
Zahra AzzouzLaboratoire de Microbiologie Appliquée (LMA), Faculté Des Sciences de La Nature Et de La Vie, Université de Bejaia, 06000, Bejaia, Algeria.ORCID http://orcid.org/0000-0001-5524-238X
Azzeddine BettacheLaboratoire de Microbiologie Appliquée (LMA), Faculté Des Sciences de La Nature Et de La Vie, Université de Bejaia, 06000, Bejaia, Algeria.ORCID http://orcid.org/0000-0003-4813-1387
Said BenallaouaLaboratoire de Microbiologie Appliquée (LMA), Faculté Des Sciences de La Nature Et de La Vie, Université de Bejaia, 06000, Bejaia, Algeria.
Marilize Le Roes-HillApplied Microbial and Health Biotechnology Institute, Cape Peninsula University of Technology, Bellville, South Africa. leroesm@cput.ac.za.ORCID http://orcid.org/0000-0002-1930-2637
University of Béjaïa · DZCape Peninsula University of Technology · ZA

Funding

National Research Foundation of South Africa 105873
6 · The paper itself

Abstract

Unique environments often serve as a source of novel microorganisms with novel chemistries. In this study, telluric samples collected from different regions of Algeria were processed for the isolation of novel peroxidase-producing actinobacterial strains. An agar-based screening identified 45 isolates with the ability to produce peroxidase. The 16S rRNA gene sequencing showed that most of the strains belong to the genus Streptomyces. Optimization of cultivation conditions was performed for the top five peroxidase-producing strains. Apart from strain 36 (optimal growth temperature of 30 °C) and strain 45 (optimal medium pH of 6.0), the strains exhibited optimal peroxidase production when cultivated for 5 days at 37 °C and in a medium at pH 7.0. Extracellular peroxidase production was induced by ferulic acid in three of the five strains, while the presence of canola lignocellulosic waste (CLW) induced peroxidase production in all strains. Strain 19 (S19) was selected for further optimization and the extracellular peroxidase purified using acid and acetone precipitation, followed by size exclusion chromatography. The purified fraction showed a single band on the polyacrylamide gel with an estimated molecular weight of 21.45 kDa. Genome analysis confirmed the assignment of S19 to the genus Streptomyces, the presence of genes encoding for peroxidases, and the presence of genes encoding for carbohydrate-active enzymes. The presence of biosynthetic gene clusters potentially encoding for biosurfactants further highlighted the great biotechnological potential of the strain.

Indexed as

ActinobacteriaStreptomycesAlgeriaPeroxidasePhylogenyRNA, Ribosomal, 16SPeroxidaseRNA, Ribosomal, 16SActinobacteriaCanola lignocellulosic wasteGenome sequencingOptimizationPeroxidasePurification

Identifiers

PMID35059906
OpenAlexW4205598366

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.