Evidence map›Paper›PMID 35059888›Full record

ArticleJournal of bone and mineral metabolism2022

An eQTL variant of ALDH1A2 is associated with Kashin-Beck disease in Chinese population.

Di Zhang, Qiang Li, Dandan Zhang, Xiaoli Yang, Chen Wang, Rongqiang Zhang, Xuena Yang, Zhaofang Li, Yongmin Xiong

Abstract read
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In one paragraph

Article in Journal of bone and mineral metabolism, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Di Zhang *Institute of Endemic Diseases and Key Laboratory of Trace Elements and Endemic Diseases, School of Public Health, National Health Commission of the People's Republic of China, Xi'an Jiaotong University Health Science Center, Xi'an, 710061, Shaanxi, People's Republic of China.ORCID http://orcid.org/0000-0002-5704-4341
Qiang Li *Institute of Endemic Diseases and Key Laboratory of Trace Elements and Endemic Diseases, School of Public Health, National Health Commission of the People's Republic of China, Xi'an Jiaotong University Health Science Center, Xi'an, 710061, Shaanxi, People's Republic of China.
Dandan ZhangInstitute of Endemic Diseases and Key Laboratory of Trace Elements and Endemic Diseases, School of Public Health, National Health Commission of the People's Republic of China, Xi'an Jiaotong University Health Science Center, Xi'an, 710061, Shaanxi, People's Republic of China.
Xiaoli YangInstitute of Endemic Diseases and Key Laboratory of Trace Elements and Endemic Diseases, School of Public Health, National Health Commission of the People's Republic of China, Xi'an Jiaotong University Health Science Center, Xi'an, 710061, Shaanxi, People's Republic of China.
Chen WangInstitute of Endemic Diseases and Key Laboratory of Trace Elements and Endemic Diseases, School of Public Health, National Health Commission of the People's Republic of China, Xi'an Jiaotong University Health Science Center, Xi'an, 710061, Shaanxi, People's Republic of China.
Rongqiang ZhangInstitute of Endemic Diseases and Key Laboratory of Trace Elements and Endemic Diseases, School of Public Health, National Health Commission of the People's Republic of China, Xi'an Jiaotong University Health Science Center, Xi'an, 710061, Shaanxi, People's Republic of China.
Xuena YangInstitute of Endemic Diseases and Key Laboratory of Trace Elements and Endemic Diseases, School of Public Health, National Health Commission of the People's Republic of China, Xi'an Jiaotong University Health Science Center, Xi'an, 710061, Shaanxi, People's Republic of China.
Zhaofang LiInstitute of Endemic Diseases and Key Laboratory of Trace Elements and Endemic Diseases, School of Public Health, National Health Commission of the People's Republic of China, Xi'an Jiaotong University Health Science Center, Xi'an, 710061, Shaanxi, People's Republic of China.
Yongmin XiongInstitute of Endemic Diseases and Key Laboratory of Trace Elements and Endemic Diseases, School of Public Health, National Health Commission of the People's Republic of China, Xi'an Jiaotong University Health Science Center, Xi'an, 710061, Shaanxi, People's Republic of China. xiongym@mail.xjtu.edu.cn.
National Health and Family Planning Commission · CN

Funding

National Natural Science Foundation of China 81573104National Natural Science Foundation of China 81773372National Natural Science Foundation of China 82073494the Graduate Innovation Experiment Center of Xi'an Jiaotong University YJSCX-2018-015
6 · The paper itself

Abstract

introductionThe aims of the study were to investigate the relationship between aldehyde dehydrogenase 1 family member A2 (ALDH1A2) and Kashin-Beck disease (KBD), explore the effects of the rs3204689 polymorphism and methylation status on the expression levels of ALDH1A2, and further clarify the pathogenesis of KBD. MATERIALS AND

methodsThe genotype of ALDH1A2 rs3204689 was detected by PCR-RFLP in 103 KBD patients and 109 healthy controls in the whole blood. The mRNA level of ALDH1A2 was measured by qRT-PCR, and the protein expression was detected using IHC staining and Western blotting. The MSP-PCR was used to identify the ALDH1A2 methylation level.

resultsThere were significant differences in G/G, G/C, and C/C frequencies of ALDH1A2 rs3204689 between the KBD and control groups (χ

conclusionOur case-control study indicates that the common variant rs3204689 near ALDH1A2 is associated with KBD in Chinese population. The risk allele G of rs3204689 is statistically linked to the high expression of ALDH1A2, which is up-regulated in the cartilage and whole blood of KBD patients. Our findings suggest a potential role of ALDH1A2 in the pathogenesis of KBD.

Indexed as

Aldehyde Dehydrogenase 1 FamilyKashin-Beck DiseaseRetinal DehydrogenaseAsian PeopleCase-Control StudiesChinaHumansQuantitative Trait LociAldehyde Dehydrogenase 1 FamilyALDH1A2 protein, humanRetinal DehydrogenaseALDH1A2DNA methylationeQTLKashin-Beck diseasePolymorphism

Identifiers

PMID35059888
OpenAlexW4205703100

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.