Evidence map›Paper›PMID 35059862›Full record

ArticleCurrent microbiology2022

DNA Metabarcoding from Microbial Communities Recovered from Stream and Its Potential for Bioremediation Processes.

Júlia Ronzella Ottoni, Rosane Dos Santos Grignet, Maria Gabriela Azevedo Barros, Suzan Prado Fernandes Bernal, Andressa Alves Silva Panatta, Gileno Vieira Lacerda-Júnior, Victor Borin Centurion, Tiago Palladino Delforno, Caroline da Costa Silva Goncalves, Michel Rodrigo Zambrano Passarini

Abstract read
PubMed Publisher
In one paragraph

Article in Current microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Júlia Ronzella OttoniLaboratory of Environmental Biotechnology, Federal University of Latin-American Integration - UNILA, Av. Tarquínio Joslin Dos Santos, 1000-Jd Universitário, G11, Foz do Iguaçu, Paraná, 85870-901, Brazil.
Rosane Dos Santos GrignetLaboratory of Environmental Biotechnology, Federal University of Latin-American Integration - UNILA, Av. Tarquínio Joslin Dos Santos, 1000-Jd Universitário, G11, Foz do Iguaçu, Paraná, 85870-901, Brazil.
Maria Gabriela Azevedo BarrosLaboratory of Environmental Biotechnology, Federal University of Latin-American Integration - UNILA, Av. Tarquínio Joslin Dos Santos, 1000-Jd Universitário, G11, Foz do Iguaçu, Paraná, 85870-901, Brazil.
Suzan Prado Fernandes BernalLaboratory of Environmental Biotechnology, Federal University of Latin-American Integration - UNILA, Av. Tarquínio Joslin Dos Santos, 1000-Jd Universitário, G11, Foz do Iguaçu, Paraná, 85870-901, Brazil.
Andressa Alves Silva PanattaLaboratory of Environmental Biotechnology, Federal University of Latin-American Integration - UNILA, Av. Tarquínio Joslin Dos Santos, 1000-Jd Universitário, G11, Foz do Iguaçu, Paraná, 85870-901, Brazil.
Gileno Vieira Lacerda-JúniorBrazilian Agricultural Research Corporation, Embrapa Meio Ambiente, Jaguariúna, Brazil.
Victor Borin CenturionChemical, Biological and Agricultural Pluridisciplinary Research Center (CPQBA), Campinas State University (UNICAMP), Paulínia, São Paulo, 13148-218, Brazil.
Tiago Palladino DelfornoInnovation Institute for Biotechnology (SENAI-Biotech), Rua Anhaia, 1321 - Bom Retiro - São Paulo, São Paul, CEP: 01130-000, Brazil.
Caroline da Costa Silva GoncalvesLaboratory of Environmental Biotechnology, Federal University of Latin-American Integration - UNILA, Av. Tarquínio Joslin Dos Santos, 1000-Jd Universitário, G11, Foz do Iguaçu, Paraná, 85870-901, Brazil.
Michel Rodrigo Zambrano PassariniLaboratory of Environmental Biotechnology, Federal University of Latin-American Integration - UNILA, Av. Tarquínio Joslin Dos Santos, 1000-Jd Universitário, G11, Foz do Iguaçu, Paraná, 85870-901, Brazil. michel.passarini@unila.edu.br.ORCID https://orcid.org/0000-0002-8614-1896
Universidade Federal da Integração Latino-Americana · BRBrazilian Agricultural Research Corporation · BRServiço Nacional de Aprendizagem Industrial · BRUniversidade Estadual de Campinas (UNICAMP) · BR

Funding

edital no 80/2019/prppg (paip 2019) 80/2019edital prppg no 96/2020 (proap/unila - 2020) 96/2020
6 · The paper itself

Abstract

Urban waste (UW) has caused a series of problems regarding its management. UW comprises domestic, hospital and industrial residues, which makes the destination of this waste a matter of concern, as it may contain a variety of highly toxic environmental polluters. Deactivated dumps can represent sources of contamination of the environment that surround these deposits, harming rivers and inhabiting organisms. Knowledge of the microbial profile of water bodies that can be affected by these toxic residues is essential for the development of alternatives and improvements in treatments applied in rivers and streams. In this sense, this work aimed to analyze the microbial community present in sediments of the Arroio Dourado stream in the municipality of Foz do Iguaçu, a stream located near a deactivated open-air dump. 16S rDNA metabarcoding suggested the dominance of acidogenic bacteria belonging to Acidobacteriota phylum, followed by less abundant phyla Actinobacteriota, Myxococcota, Chloroflexi and a small community of sulfate reducers (Desulfobacteriota). However, more than 50% of amplicon sequence variants (ASVs) were not taxonomically classified. In addition, an expressive abundance was attributed to the genus Anaeromyxobacter, a metabolically versatile group, which can thrive in the presence of polluting compounds present in the deactivated landfill. Thus, a possible stream treatment process can be developed. In addition, culture media can be developed for the recovery of taxonomic groups identified involved in the biodegradation of organic compounds. The results presented expand the knowledge of bacterial diversity in sediment samples recovered from the Arroio Dourado stream.

Indexed as

MicrobiotaRiversBacteriaBiodegradation, EnvironmentalDNA Barcoding, Taxonomic

Identifiers

PMID35059862
OpenAlexW4205154967

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.