Evidence map›Paper›PMID 35059856›Full record

ArticleExtremophiles : life under extreme conditions2022

Prokaryotic diversity across a pH gradient in the "El Chichón" crater-lake: a naturally thermo-acidic environment.

Irving Oswaldo Velázquez-Ríos, Reiner Rincón-Rosales, Federico Antonio Gutiérrez-Miceli, Rocio J Alcántara-Hernández, Víctor Manuel Ruíz-Valdiviezo

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In one paragraph

Article in Extremophiles : life under extreme conditions, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Irving Oswaldo Velázquez-RíosTecnológico Nacional de México/IT de Tuxtla Gutiérrez, Carretera Panamericana km. 1080, Tuxtla Gutiérrez CP, 29050, Chiapas, México.
Reiner Rincón-RosalesTecnológico Nacional de México/IT de Tuxtla Gutiérrez, Carretera Panamericana km. 1080, Tuxtla Gutiérrez CP, 29050, Chiapas, México.
Federico Antonio Gutiérrez-MiceliTecnológico Nacional de México/IT de Tuxtla Gutiérrez, Carretera Panamericana km. 1080, Tuxtla Gutiérrez CP, 29050, Chiapas, México.
Rocio J Alcántara-Hernández *Instituto de Geología, Universidad Nacional Autónoma de México, Ciudad Universitaria, Av. Universidad 3000, Del. Coyoacán, 04510, Ciudad de México, México. ralcantarah@geologia.unam.mx.ORCID http://orcid.org/0000-0002-6626-715X
Víctor Manuel Ruíz-Valdiviezo *Tecnológico Nacional de México/IT de Tuxtla Gutiérrez, Carretera Panamericana km. 1080, Tuxtla Gutiérrez CP, 29050, Chiapas, México. bioqvic@hotmail.com.ORCID http://orcid.org/0000-0003-0572-8845

Funding

Consejo Nacional de Ciencia y Tecnología (CONACyT) CB-2015- 253281UNAM-PAPIIT IN121420
6 · The paper itself

Abstract

The "El Chichón" crater-lake in Mexico is a thermo-acidic environment whose microorganisms have been scarcely studied. In this study, we surveyed the prokaryotic communities by amplicon sequencing of the 16S rRNA gene considering samples of sediment and water collected within a pH/temperature gradient (pH 1.9-5.1, 38-89 °C). Further, we interpreted these results within a physicochemical context. The composition of the microbial assemblage differed significantly between the sediments and water. Sediment communities were different in the site with the highest temperature and lower pH value compared to the other ones sampled, while those in the water were relatively similar at all points. Most of the genera found were related to Alicyclobacillus, Acinetobacter, Bacillus, Mesoaciditoga, Methanothermobacter, Desulfitobacterium, Therminicanus, Kyrpidia, Paenibacillus, Thermoanaerobacterium, and Gelria. Some of these genera are known by their thermo-acidic tolerant capacities with flexible metabolisms to use diverse electron donor/acceptors (S or Fe), while others are thermo(acid)philes that mainly occur in the most extreme sites of the lake. These results show the presence of a microbial community adapted to the changing conditions of a very dynamic crater-lake, that include chemoorganotrophs and chemolithotrophs.

Indexed as

Geologic SedimentsLakesPhylogenyProton-Motive ForceRNA, Ribosomal, 16SRNA, Ribosomal, 16SAcidophilesBacteria and archaeaCrater-lakeExtremophilesVolcanic environments

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.