Evidence map›Paper›PMID 35050691›Full record

ReviewCirculation research2022

Detecting Cardiovascular Protein-Protein Interactions by Proximity Proteomics.

Jared S Kushner, Guoxia Liu, Robyn J Eisert, Gary A Bradshaw, Geoffrey S Pitt, J Travis Hinson, Marian Kalocsay, Steven O Marx

Open access · bronzeAbstract readReview
In one paragraph

Review in Circulation research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Comparison of two peroxidases with high potential for biotechnology applications - HRPComputational and structural biotechnology journal · 2024
    Article
  3. Article
  4. Review
  5. Article
  6. Proteomics of the heart.Physiological reviews · 2024
    Review
  7. Review
  8. Article
  9. Article
  10. Review
  11. Rad regulation of CaNature cardiovascular research · 2022
    Article
  12. Vasculature remodeling by pressure, caveolae, calcium, and kinases.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Jared S KushnerDivision of Cardiology, Department of Medicine (J.S.K., G.L., S.O.M.), Columbia University, Vagelos College of Physicians and Surgeons, New York, NY.ORCID 0000-0003-4821-0990
Guoxia LiuDivision of Cardiology, Department of Medicine (J.S.K., G.L., S.O.M.), Columbia University, Vagelos College of Physicians and Surgeons, New York, NY.
Robyn J EisertDepartment of Systems Biology, Laboratory of Systems Pharmacology, Harvard Medical School, Boston, MA (R.J.E., G.A.B., M.K.).
Gary A BradshawDepartment of Systems Biology, Laboratory of Systems Pharmacology, Harvard Medical School, Boston, MA (R.J.E., G.A.B., M.K.).ORCID 0000-0001-9724-6100
Geoffrey S PittCardiovascular Research Institute, Weill Cornell Medical College, New York, NY (G.S.P.).ORCID 0000-0003-2246-0289
J Travis HinsonCardiology Center, UConn Health, Farmington, CT (J.T.H.).ORCID 0000-0003-1455-113X
Marian KalocsayDepartment of Systems Biology, Laboratory of Systems Pharmacology, Harvard Medical School, Boston, MA (R.J.E., G.A.B., M.K.).ORCID 0000-0002-4187-5829
Steven O MarxDivision of Cardiology, Department of Medicine (J.S.K., G.L., S.O.M.), Columbia University, Vagelos College of Physicians and Surgeons, New York, NY.ORCID 0000-0002-0577-6030
Center for Systems Biology · USColumbia University · USCornell University · USJackson Laboratory · US

Funding

L-type channel trafficking and modulation in heartR01HL121253 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Henry M. Colecraft, Steven O Marx · 2014 to 2026
$8.4M
Exploring the Molecular Physiology of Atrial FibrillationR01HL140934 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MARKS, ANDREW ROBERT, MARX, STEVEN O · 2018 to 2025
$6.0M
Phosphorylation-dependent regulation of calcium channels by macromolecular complexesR01HL146149 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Steven O Marx, Geoffrey S Pitt · 2019 to 2026
$5.0M
Investigating Cardiac Ion Channels by Novel MethodsR01HL155377 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Steven O Marx · 2021 to 2026
$3.8M
Dynamic changes of the Nav1.5 interactome and contributions to heart failureR01HL160089 · NHLBI · WEILL MEDICAL COLL OF CORNELL UNIV · PI MARX, STEVEN O, PITT, GEOFFREY S · 2021 to 2024
$2.7M
SCGE Disease Models Studies Supplement: Cardioediting Ttntvs in a humanized mouse modelU01HL156349 · NHLBI · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI HINSON, JOHN TRAVIS · 2020 to 2022
$2.4M
Comprehensive Analysis of Allelic, Cellular and Molecular Heterogeneity in Human 3-Dimensional Cardiac Microtissues with MYH7 MutationsR01HL142787 · NHLBI · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI HINSON, JOHN TRAVIS · 2018 to 2021
$2.1M
Multidisciplinary Research Training in Cardiovascular DiseaseT32HL160520 · NHLBI · WEILL MEDICAL COLL OF CORNELL UNIV · PI Geoffrey S Pitt, Jonathan W. Weinsaft · 2022 to 2026
$2.0M
Regulators and interactomes of CaV1.2 in health and diseaseK08HL151969 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI KUSHNER, JARED S · 2021 to 2025
$827k
Human cardiac microtissues with innate immune sensing to study adverse consequences of genome editingU01EB028898 · NIBIB · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI HINSON, JOHN TRAVIS · 2019 to 2019
$752k
NHLBI NIH HHS K08 HL151969NHLBI NIH HHS R01 HL121253NHLBI NIH HHS R01 HL140934NHLBI NIH HHS R01 HL142787NHLBI NIH HHS R01 HL146149NHLBI NIH HHS R01 HL155377NHLBI NIH HHS R01 HL160089NHLBI NIH HHS T32 HL160520NHLBI NIH HHS U01 HL156349NIBIB NIH HHS U01 EB028898
6 · The paper itself

Abstract

Rapidly changing and transient protein-protein interactions regulate dynamic cellular processes in the cardiovascular system. Traditional methods, including affinity purification and mass spectrometry, have revealed many macromolecular complexes in cardiomyocytes and the vasculature. Yet these methods often fail to identify in vivo or transient protein-protein interactions. To capture these interactions in living cells and animals with subsequent mass spectrometry identification, enzyme-catalyzed proximity labeling techniques have been developed in the past decade. Although the application of this methodology to cardiovascular research is still in its infancy, the field is developing rapidly, and the promise is substantial. In this review, we outline important concepts and discuss how proximity proteomics has been applied to study physiological and pathophysiological processes relevant to the cardiovascular system.

Indexed as

Protein Interaction MapsAnimalsHumansMyocardiumProtein Interaction MappingProteomeProteomicsProteomeanimalsmass spectrometrymuscle cellsprotein interaction mappingproteomics

Identifiers

PMID35050691
PMCPMC8852690
OpenAlexW4205137128

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.