Evidence map›Paper›PMID 35050652›Full record

ArticleScience (New York, N.Y.)2022

High-speed fluorescence image-enabled cell sorting.

Daniel Schraivogel, Terra M Kuhn, Benedikt Rauscher, Marta Rodríguez-Martínez, Malte Paulsen, Keegan Owsley, Aaron Middlebrook, Christian Tischer, Beáta Ramasz, Diana Ordoñez-Rueda and 4 more

Abstract read
In one paragraph

Article in Science (New York, N.Y.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 134 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
134citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

134 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Decoding Immune Cell Doublets in Humans: From Artifacts to Insights.Cytometry. Part A : the journal of the International Society for Analytical Cytology · 2026
    Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. KAS-CUT&Tag for direct mapping of transcription bubbles.bioRxiv : the preprint server for biology · 2026
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review

74 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Daniel SchraivogelGenome Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany.ORCID 0000-0002-5734-6980
Terra M Kuhn *Cell Biology and Biophysics Unit, EMBL, Heidelberg, Germany.ORCID 0000-0001-6709-1179
Benedikt Rauscher *Genome Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany.ORCID 0000-0002-1627-532X
Marta Rodríguez-Martínez *Genome Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany.
Malte PaulsenFlow Cytometry Core Facility, EMBL, Heidelberg, Germany.
Keegan OwsleyBD Biosciences, San Jose, CA, USA.ORCID 0000-0003-2436-0716
Aaron MiddlebrookBD Biosciences, San Jose, CA, USA.ORCID 0000-0003-3597-5636
Christian TischerAdvanced Light Microscopy Core Facility, EMBL, Heidelberg, Germany.ORCID 0000-0003-4105-1990
Beáta RamaszFlow Cytometry Core Facility, EMBL, Heidelberg, Germany.
Diana Ordoñez-RuedaFlow Cytometry Core Facility, EMBL, Heidelberg, Germany.ORCID 0000-0002-8387-6707
Martina DeesCell Biology and Biophysics Unit, EMBL, Heidelberg, Germany.
Sara Cuylen-HaeringCell Biology and Biophysics Unit, EMBL, Heidelberg, Germany.ORCID 0000-0002-1193-4648
Eric DieboldBD Biosciences, San Jose, CA, USA.ORCID 0000-0002-5235-9520
Lars M SteinmetzGenome Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany.ORCID 0000-0002-3962-2865

Funding

European Research Council 294542European Research Council 742804
6 · The paper itself

Abstract

Fast and selective isolation of single cells with unique spatial and morphological traits remains a technical challenge. Here, we address this by establishing high-speed image-enabled cell sorting (ICS), which records multicolor fluorescence images and sorts cells based on measurements from image data at speeds up to 15,000 events per second. We show that ICS quantifies cell morphology and localization of labeled proteins and increases the resolution of cell cycle analyses by separating mitotic stages. We combine ICS with CRISPR-pooled screens to identify regulators of the nuclear factor κB (NF-κB) pathway, enabling the completion of genome-wide image-based screens in about 9 hours of run time. By assessing complex cellular phenotypes, ICS substantially expands the phenotypic space accessible to cell-sorting applications and pooled genetic screening.

Indexed as

Flow CytometryOptical ImagingActive Transport, Cell NucleusAnimalsCell NucleusCell ShapeCRISPR-Cas SystemsGenetic TechniquesGenomeGenome, HumanHumansMicroscopy, FluorescenceMitosisNF-kappa BOrganellesPhenotypeNF-kappa BRELA protein, humanTranscription Factor RelA

Identifiers

PMID35050652
PMCPMC7613231

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.