Evidence map›Paper›PMID 35050179›Full record

ArticleMetabolites2022

Estimated Renal Metabolomics at Reperfusion Predicts One-Year Kidney Graft Function.

Thomas Verissimo, Anna Faivre, Sebastian Sgardello, Maarten Naesens, Sophie de Seigneux, Gilles Criton, David Legouis

Abstract read
In one paragraph

Article in Metabolites, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Thomas VerissimoLaboratory of Nephrology, Department of Medicine, University Hospitals of Geneva, 1205 Geneva, Switzerland.
Anna FaivreLaboratory of Nephrology, Department of Medicine, University Hospitals of Geneva, 1205 Geneva, Switzerland.ORCID 0000-0002-1752-7533
Sebastian SgardelloDepartment of Surgery, University Hospital of Geneva, 1205 Geneva, Switzerland.
Maarten NaesensService of Nephrology, University Hospitals of Leuven, 3000 Leuven, Belgium.
Sophie de SeigneuxLaboratory of Nephrology, Department of Medicine, University Hospitals of Geneva, 1205 Geneva, Switzerland.
Gilles CritonGeneva School of Economics and Management, University of Geneva, 1205 Geneva, Switzerland.
David LegouisLaboratory of Nephrology, Department of Medicine, University Hospitals of Geneva, 1205 Geneva, Switzerland.

Funding

Ernst and Lucie Schmidheiny Foundation NAGeneva University Hospitals PRD 4-2021-IIGeneva University Hospitals PRD 5-2020-I
6 · The paper itself

Abstract

Renal transplantation is the gold-standard procedure for end-stage renal disease patients, improving quality of life and life expectancy. Despite continuous advancement in the management of post-transplant complications, progress is still needed to increase the graft lifespan. Early identification of patients at risk of rapid graft failure is critical to optimize their management and slow the progression of the disease. In 42 kidney grafts undergoing protocol biopsies at reperfusion, we estimated the renal metabolome from RNAseq data. The estimated metabolites' abundance was further used to predict the renal function within the first year of transplantation through a random forest machine learning algorithm. Using repeated K-fold cross-validation we first built and then tuned our model on a training dataset. The optimal model accurately predicted the one-year eGFR, with an out-of-bag root mean square root error (RMSE) that was 11.8 ± 7.2 mL/min/1.73 m

Indexed as

AKI (acute kidney injury)machine learningmetabolomicsrenal transplantation

Identifiers

PMID35050179
PMCPMC8778290

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.