Evidence map›Paper›PMID 35050157›Full record

ArticleMetabolites2022

Urinary Volatomic Expression Pattern: Paving the Way for Identification of Potential Candidate Biosignatures for Lung Cancer.

Khushman Taunk, Priscilla Porto-Figueira, Jorge A M Pereira, Ravindra Taware, Nattane Luíza da Costa, Rommel Barbosa, Srikanth Rapole, José S Câmara

Open access · goldAbstract read
In one paragraph

Article in Metabolites, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Khushman TaunkProteomics Lab, National Centre for Cell Science (NCCS), Ganeshkhind, SPPU Campus, Pune 411007, India.ORCID 0000-0003-2293-2936
Priscilla Porto-FigueiraCQM-Centro de Química da Madeira, Centro de Ciências Exatas e da Engenharia, Universidade da Madeira, Campus Universitário da Penteada, 9020-105 Funchal, Portugal.
Jorge A M PereiraCQM-Centro de Química da Madeira, Centro de Ciências Exatas e da Engenharia, Universidade da Madeira, Campus Universitário da Penteada, 9020-105 Funchal, Portugal.ORCID 0000-0003-0316-5348
Ravindra TawareProteomics Lab, National Centre for Cell Science (NCCS), Ganeshkhind, SPPU Campus, Pune 411007, India.
Nattane Luíza da CostaInstituto de Informática, Alameda Palmeiras, Quadra D, Campus Samambaia, Universidade Federal de Goiás, Goiânia 74690-900, GO, Brazil.
Rommel BarbosaInstituto de Informática, Alameda Palmeiras, Quadra D, Campus Samambaia, Universidade Federal de Goiás, Goiânia 74690-900, GO, Brazil.
Srikanth RapoleProteomics Lab, National Centre for Cell Science (NCCS), Ganeshkhind, SPPU Campus, Pune 411007, India.ORCID 0000-0003-0273-0819
José S CâmaraCQM-Centro de Química da Madeira, Centro de Ciências Exatas e da Engenharia, Universidade da Madeira, Campus Universitário da Penteada, 9020-105 Funchal, Portugal.ORCID 0000-0003-1965-3151
National Centre for Cell Science · INUniversidade da Madeira · PTUniversidade Federal de Goiás · BR

Funding

ARDITI-Agência Regional para o Desenvolvimento da Investigação Tecnologia e Inovação M1420-01-0145-FEDER-000005ARDITI-Agência Regional para o Desenvolvimento da Investigação Tecnologia e Inovação M1420-09-5369-FSE-000001Fundação para a Ciência e Tecnologia SFRH/BD/129630/2017Fundação para a Ciência e Tecnologia UIDB/00674/2020Fundação para a Ciência e Tecnologia UIDP/00674/2020Inno-INDIGO NCDs-CAPomics NCDs-CAPomicsMadeira 14-20 M14-20 M1420-01-0145-FEDER-000008
6 · The paper itself

Abstract

The urinary volatomic profiling of Indian cohorts composed of 28 lung cancer (LC) patients and 27 healthy subjects (control group, CTRL) was established using headspace solid phase microextraction technique combined with gas chromatography mass spectrometry methodology as a powerful approach to identify urinary volatile organic metabolites (uVOMs) to discriminate among LC patients from CTRL. Overall, 147 VOMs of several chemistries were identified in the intervention groups-including naphthalene derivatives, phenols, and organosulphurs-augmented in the LC group. In contrast, benzene and terpenic derivatives were found to be more prevalent in the CTRL group. The volatomic data obtained were processed using advanced statistical analysis, namely partial least square discriminative analysis (PLS-DA), support vector machine (SVM), random forest (RF), and multilayer perceptron (MLP) methods. This resulted in the identification of nine uVOMs with a higher potential to discriminate LC patients from CTRL subjects. These were furan, o-cymene, furfural, linalool oxide, viridiflorene, 2-bromo-phenol, tricyclazole, 4-methyl-phenol, and 1-(4-hydroxy-3,5-di-tert-butylphenyl)-2-methyl-3-morpholinopropan-1-one. The metabolic pathway analysis of the data obtained identified several altered biochemical pathways in LC mainly affecting glycolysis/gluconeogenesis, pyruvate metabolism, and fatty acid biosynthesis. Moreover, acetate and octanoic, decanoic, and dodecanoic fatty acids were identified as the key metabolites responsible for such deregulation. Furthermore, studies involving larger cohorts of LC patients would allow us to consolidate the data obtained and challenge the potential of the uVOMs as candidate biomarkers for LC.

Indexed as

GC-qMSHS-SPMElung cancer (LC) biomarkersvolatile organic metabolites (VOMs)

Identifiers

PMID35050157
PMCPMC8780352
OpenAlexW4206068438

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.