Evidence map›Paper›PMID 35048450›Full record

ArticleProtein science : a publication of the Protein Society2022

Structures of plasmepsin X from Plasmodium falciparum reveal a novel inactivation mechanism of the zymogen and molecular basis for binding of inhibitors in mature enzyme.

Pooja Kesari, Anuradha Deshmukh, Nikhil Pahelkar, Abhishek B Suryawanshi, Ishan Rathore, Vandana Mishra, John H Dupuis, Huogen Xiao, Alla Gustchina, Jan Abendroth and 6 more

Abstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Inhibition ofCurrent research in structural biology · 2024
    Article
  5. Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Pooja KesariDepartment of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, India.ORCID 0000-0002-7480-3899
Anuradha DeshmukhDepartment of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, India.ORCID 0000-0002-0866-9513
Nikhil PahelkarDepartment of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, India.ORCID 0000-0003-3172-8734
Abhishek B SuryawanshiDepartment of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, India.ORCID 0000-0002-5016-7349
Ishan RathoreDepartment of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, India.ORCID 0000-0003-3377-4582
Vandana MishraDepartment of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, India.
John H DupuisFood, Nutrition, and Health Program, Faculty of Land and Food Systems, University of British Columbia, Vancouver, British Columbia, Canada.
Huogen XiaoSummerland Research and Development Center, Agriculture and Agri-Food Canada, Summerland, British Columbia, Canada.
Alla GustchinaProtein Structure Section, Center for Structural Biology, National Cancer Institute, Frederick, Maryland, USA.
Jan AbendrothUCB Pharma, Bainbridge Island, Washington, USA.
Mehdi LabaiedUCB Pharma, Bainbridge Island, Washington, USA.
Rickey Y YadaFood, Nutrition, and Health Program, Faculty of Land and Food Systems, University of British Columbia, Vancouver, British Columbia, Canada.
Alexander WlodawerProtein Structure Section, Center for Structural Biology, National Cancer Institute, Frederick, Maryland, USA.ORCID 0000-0002-5510-9703
Thomas E EdwardsUCB Pharma, Bainbridge Island, Washington, USA.
Donald D LorimerUCB Pharma, Bainbridge Island, Washington, USA.
Prasenjit BhaumikDepartment of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, India.ORCID 0000-0003-1257-9809

Funding

Protein StructureZIABC010348 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI WLODAWER, ALEXANDER · 2009 to 2025
$27.5M
NIAID NIH HHS HHSN272201700059C
6 · The paper itself

Abstract

Plasmodium falciparum plasmepsin X (PfPMX), involved in the invasion and egress of this deadliest malarial parasite, is essential for its survival and hence considered as an important drug target. We report the first crystal structure of PfPMX zymogen containing a novel fold of its prosegment. A unique twisted loop from the prosegment and arginine 244 from the mature enzyme is involved in zymogen inactivation; such mechanism, not previously reported, might be common for apicomplexan proteases similar to PfPMX. The maturation of PfPMX zymogen occurs through cleavage of its prosegment at multiple sites. Our data provide thorough insights into the mode of binding of a substrate and a potent inhibitor 49c to PfPMX. We present molecular details of inactivation, maturation, and inhibition of PfPMX that should aid in the development of potent inhibitors against pepsin-like aspartic proteases from apicomplexan parasites.

Indexed as

Aspartic Acid EndopeptidasesEnzyme PrecursorsPlasmodium falciparumProtozoan ProteinsAspartic Acid EndopeptidasesEnzyme PrecursorsplasmepsinProtozoan Proteins49c inhibitorapicomplexan parasiteP. falciparumplasmepsin Xzymogen

Identifiers

PMID35048450
PMCPMC8927862

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.