Evidence map›Paper›PMID 35044652›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2022

Immunofluorescence-Based Method to Assess Cancer Biomarker in the Hypoxic Region of the Tumor.

Leslimar Rios-Colon, Susy Kim, Yixin Su, Deepak Kumar, Gagan Deep

Open access · greenAbstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Leslimar Rios-ColonDepartment of Cancer Biology, Wake Forest School of Medicine, Winston-Salem, NC, USA.
Susy KimDepartment of Cancer Biology, Wake Forest School of Medicine, Winston-Salem, NC, USA.
Yixin SuDepartment of Cancer Biology, Wake Forest School of Medicine, Winston-Salem, NC, USA.
Deepak KumarJulius L. Chambers Biomedical Biotechnology Research Institute, North Carolina Central University, Durham, NC, USA.
Gagan DeepDepartment of Cancer Biology, Wake Forest School of Medicine, Winston-Salem, NC, USA. gdeep@wakehealth.edu.
Wake Forest University · USNorth Carolina Central University · US

Funding

Tumor Tissue CoreP30CA012197 · NCI · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI Ruben A. Mesa · 1985 to 2026
$55.4M
Understanding Perceptions of HIV Risk, PrEP, and PrEP use among African American Women Attending an HBCUU54MD012392 · NIMHD · NORTH CAROLINA CENTRAL UNIVERSITY · PI Kevin Peter Williams · 2017 to 2026
$38.1M
Wake Forest Clinical and Translational Science AwardUL1TR001420 · NCATS · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI ARD, JAMY D, FOLEY, KRISTIE L · 2015 to 2023
$32.3M
Molecular Determinants of Social Factors in Prostate CancerR01MD012767 · NIMHD · NORTH CAROLINA CENTRAL UNIVERSITY · PI KUMAR, DEEPAK · 2017 to 2021
$5.7M
NCATS NIH HHS UL1 TR001420NCI NIH HHS P30 CA012197NIMHD NIH HHS R01 MD012767NIMHD NIH HHS U54 MD012392
6 · The paper itself

Abstract

The development of novel imaging technologies allows the analysis of the expression and spatial distribution of multiple markers simultaneously, providing necessary information about a cellular identity and the surrounding microenvironment. This chapter describes the utilization of immunofluorescence to identify such biomarkers in fixed tissue from prostate cancer (PCa) xenografts. One such marker detectable by immunofluorescence is pimonidazole, which has been utilized to locate areas of low oxygen (hypoxia). Pimonidazole, in combination with other biomarkers, could be utilized to identify "niches" in the microenvironment harboring more aggressive cells both within and outside hypoxic areas. Specifically, we describe the method to use pimonidazole for the identification of hypoxic regions in PCa xenograft tumors along with CPT1A (carnitine palmitoyltransferase 1A) expression, an indicator of β-oxidation. This approach could be useful to characterize various biomarkers in the complex hypoxic tumor microenvironment.

Indexed as

NeoplasmsNitroimidazolesBiomarkers, TumorCell HypoxiaFluorescent Antibody TechniqueHumansHypoxiaTumor MicroenvironmentBiomarkers, TumorNitroimidazolesBiomarkerCancerHypoxiaImmunofluorescencePimonidazole

Identifiers

PMID35044652
PMCPMC9116888
OpenAlexW4205776217

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.